Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K21
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    30   2.8  
02_02_0509 - 11064209-11064470,11065945-11066132,11066249-110664...    29   6.5  
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193     28   8.5  
06_03_0721 - 23861426-23861929,23862013-23862219,23862598-238628...    28   8.5  

>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
 Frame = +2

Query: 215 LRATYYNL*NDYLLKHNLIRLTA*YKMIEEYD---GNLHNKIQLLSIEKSCRICITSSYE 385
           L A++ NL ND  L+  L R++  +K  E+ +    NL N +  +  +K+    + S+ E
Sbjct: 479 LEASFENLGND--LEQELERISIMHKNNEDLELVNSNLQNDLATVQGQKN--EAVASTLE 534

Query: 386 MSNIFNEKHPEILEKIEFCTGILLKPEDGLPAHICGMCSKNLTVAFDFKTKCIFSDKILR 565
           + N   EK+ +I          L +  + L A    M ++ +TV    + KC F    L 
Sbjct: 535 LGNKLEEKNQQISN--------LQEAVENLEAAKTNMYNE-VTV---HQEKCTFLSSQLE 582

Query: 566 KLCTAVKEEHNCISEID 616
           K   A KE    +SEI+
Sbjct: 583 KAQLAEKEVQTLLSEIE 599


>02_02_0509 -
           11064209-11064470,11065945-11066132,11066249-11066493,
           11066816-11066987,11067090-11067496,11068443-11068587
          Length = 472

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +2

Query: 254 LKHNLIRLTA*YKMIEEYDGNLHNKIQLLSIEKSCRICITSSYEMSNIFNEKHPE 418
           +KHNL+RL    K I+E D   HN  +LL + KS     T S E+ ++  ++H +
Sbjct: 171 MKHNLLRLARKLKEIDE-DVQRHN--ELLEVVKS-----TPSDEIGSVIAKRHKD 217


>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
          Length = 516

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/44 (25%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 323 NKIQLLSIEKSCRICITSSYEMSNIFNEK-HPEILEKIEFCTGI 451
           +++Q +S EK C IC+   +E+  ++  + H      ++ C+G+
Sbjct: 268 HQLQNISSEKDCMICLACGWEVLGMWKMRPHFVYAHHVKHCSGV 311


>06_03_0721 -
           23861426-23861929,23862013-23862219,23862598-23862852,
           23862858-23863212,23863533-23863834,23864006-23864281,
           23864854-23865167,23865411-23865683,23865831-23866415,
           23866806-23867132,23867270-23867337,23868670-23868746
          Length = 1180

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 248 YLLKHNLIRLTA*YKMIEEYDGNLHNKIQLLSIEKSCRICITSSYEMSNIF 400
           +L KH+L  L    K+ E+ +GN    I+   +E S  I I  S E+S +F
Sbjct: 816 FLAKHSLAFLGTNSKLYEDSNGNFLGLIEFYQME-SIAIEIGLSIELSRVF 865


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,162,760
Number of Sequences: 37544
Number of extensions: 274579
Number of successful extensions: 517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)