Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K19
         (902 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    24   2.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    24   2.2  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   2.9  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.8  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 121 FQSRNSNYRGNKNSNYHYTDSY*ARRKIINM 213
           + + N+NY  N N+NY+       +  IIN+
Sbjct: 94  YNNYNNNYNNNYNNNYNNNYKKLYKNYIINI 124



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +1

Query: 127 SRNSNYRGNKNSNY--HYTDSY 186
           S  +NY  N N+NY  +Y ++Y
Sbjct: 92  SNYNNYNNNYNNNYNNNYNNNY 113


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 121 FQSRNSNYRGNKNSNYHYTDSY*ARRKIINM 213
           + + N+NY  N N+NY+       +  IIN+
Sbjct: 94  YNNYNNNYNNNYNNNYNNNYKKLYKNYIINI 124



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +1

Query: 127 SRNSNYRGNKNSNY--HYTDSY 186
           S  +NY  N N+NY  +Y ++Y
Sbjct: 92  SNYNNYNNNYNNNYNNNYNNNY 113


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 133 NSNYRGNKNSNYHYTDS 183
           N+NY  N  +NY+Y ++
Sbjct: 93  NNNYNNNNYNNYNYNNN 109


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 133 NSNYRGNKNSNYHYTDS 183
           N+NY+ N N+ Y+Y ++
Sbjct: 93  NNNYKYNYNNKYNYNNN 109


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 500 HEVDAGEGDSRSSYRARDCA-LLLGSLDDSMIVTVCLG 390
           H V +GE D+R+ Y   +   L+L  L   +I+   +G
Sbjct: 17  HTVSSGERDTRTEYYLPNWTDLVLAGLFTMLIIVTIVG 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,206
Number of Sequences: 438
Number of extensions: 4029
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)