Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K16
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    24   2.1  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   3.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   3.7  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   3.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   3.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   3.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   3.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.5  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   8.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   8.6  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 202 LVSFLTNIFVCMNFTELHFYTYKYNINNN 116
           ++S L+N  +  N    + Y  KYN NNN
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNNKYNYNNN 109


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 154 LHFYTYKYNINNN 116
           +H   YKYN NNN
Sbjct: 89  IHNNNYKYNYNNN 101


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 154 LHFYTYKYNINNN 116
           +H   YKYN NNN
Sbjct: 89  IHNNNYKYNYNNN 101


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 154 LHFYTYKYNINNN 116
           +H   YKYN NNN
Sbjct: 90  IHNNNYKYNYNNN 102


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 154 LHFYTYKYNINNN 116
           +H   YKYN NNN
Sbjct: 90  IHNNNYKYNYNNN 102


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 154 LHFYTYKYNINNN 116
           +H   YKYN NNN
Sbjct: 90  IHNNNYKYNYNNN 102


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 154 LHFYTYKYNINNN 116
           +H   YKYN NNN
Sbjct: 90  IHNNNYKYNYNNN 102


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 459 FLQRRSSQKVTYPDYYTNACCSHPLYIDEKP 551
           +L+    QK  YP YY     S+ L   ++P
Sbjct: 281 YLEEFDWQKPFYPGYYPTMTYSNGLPFPQRP 311


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 LFTFMTRVHYHDPGDGVWGE 686
           LF+F+  + Y  P   +WG+
Sbjct: 150 LFSFLNTIVYCVPAGWIWGD 169


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +2

Query: 164 IHTYENVGQKANKITVEHPKSREKIFGFRTCETCYSR*GWSGISPGRSFR 313
           I   EN  +   K  +     R +   F+   +C+SR   S    G S+R
Sbjct: 197 IEKSENETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDGNSYR 246


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 139 YKYNINNNVSRDLRSVKSFTFYDNRPNNLYRNFPXISR 26
           YKYN NNN   +  +      Y+N    LY N   I +
Sbjct: 329 YKYNYNNN---NYNNNNYNNNYNNNCKKLYYNIINIEQ 363


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,366
Number of Sequences: 438
Number of extensions: 5580
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)