Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K13
         (930 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061443-1|AAL28991.1|  197|Drosophila melanogaster LD38087p pro...   140   3e-33
AE014297-350|AAF51956.1|  197|Drosophila melanogaster CG10978-PB...   140   3e-33
AE014297-349|AAN14321.1|  197|Drosophila melanogaster CG10978-PA...   140   3e-33
AE014297-351|AAF51957.1|   91|Drosophila melanogaster CG10978-PC...    34   0.24 
AF321289-1|AAG46059.1|  744|Drosophila melanogaster SKELETOR pro...    29   6.9  
AE014297-1166|AAO41539.1|  744|Drosophila melanogaster CG33676-P...    29   6.9  

>AY061443-1|AAL28991.1|  197|Drosophila melanogaster LD38087p
           protein.
          Length = 197

 Score =  140 bits (338), Expect = 3e-33
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = +2

Query: 197 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 376
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 377 DKLDIFILEVEELQIPPPLWWEYIW 451
           D LDIF+LE+EEL++PPPLWWEY+W
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVW 85



 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = +3

Query: 453 ACRCYSRFLGLSAIKRNNIRHLRQYVYGIVALGFCPLLYCVLYYCGDVWRY 605
           A    + FLGLSA + N +R +++Y+  I+     PL YC  YY  DVW +
Sbjct: 86  AASLLTSFLGLSAARGNKVREMQKYMVAILLFAILPLFYCFAYYFSDVWEF 136


>AE014297-350|AAF51956.1|  197|Drosophila melanogaster CG10978-PB,
           isoform B protein.
          Length = 197

 Score =  140 bits (338), Expect = 3e-33
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = +2

Query: 197 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 376
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 377 DKLDIFILEVEELQIPPPLWWEYIW 451
           D LDIF+LE+EEL++PPPLWWEY+W
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVW 85



 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = +3

Query: 453 ACRCYSRFLGLSAIKRNNIRHLRQYVYGIVALGFCPLLYCVLYYCGDVWRY 605
           A    + FLGLSA + N +R +++Y+  I+     PL YC  YY  DVW +
Sbjct: 86  AASLLTSFLGLSAARGNKVREMQKYMVAILLFAILPLFYCFAYYFSDVWEF 136


>AE014297-349|AAN14321.1|  197|Drosophila melanogaster CG10978-PA,
           isoform A protein.
          Length = 197

 Score =  140 bits (338), Expect = 3e-33
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = +2

Query: 197 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 376
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 377 DKLDIFILEVEELQIPPPLWWEYIW 451
           D LDIF+LE+EEL++PPPLWWEY+W
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVW 85



 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = +3

Query: 453 ACRCYSRFLGLSAIKRNNIRHLRQYVYGIVALGFCPLLYCVLYYCGDVWRY 605
           A    + FLGLSA + N +R +++Y+  I+     PL YC  YY  DVW +
Sbjct: 86  AASLLTSFLGLSAARGNKVREMQKYMVAILLFAILPLFYCFAYYFSDVWEF 136


>AE014297-351|AAF51957.1|   91|Drosophila melanogaster CG10978-PC,
           isoform C protein.
          Length = 91

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 516 LRQYVYGIVALGFCPLLYCVLYYCGDVWRY 605
           +++Y+  I+     PL YC  YY  DVW +
Sbjct: 1   MQKYMVAILLFAILPLFYCFAYYFSDVWEF 30


>AF321289-1|AAG46059.1|  744|Drosophila melanogaster SKELETOR
           protein.
          Length = 744

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 666 VTLPTVLYPPQNYHLHHHVTNISKHPHSSTIRSTITDRILVPLCHKH 526
           + L   L PPQN  L H V    + P  + I+     R ++P  H H
Sbjct: 187 IGLSEFLRPPQNAPLFHPVKLPGRRPFPAPIKKVPASRPILPQQHPH 233


>AE014297-1166|AAO41539.1|  744|Drosophila melanogaster CG33676-PA,
           isoform A protein.
          Length = 744

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 666 VTLPTVLYPPQNYHLHHHVTNISKHPHSSTIRSTITDRILVPLCHKH 526
           + L   L PPQN  L H V    + P  + I+     R ++P  H H
Sbjct: 187 IGLSEFLRPPQNAPLFHPVKLPGRRPFPAPIKKVPASRPILPQQHPH 233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,999,822
Number of Sequences: 53049
Number of extensions: 669268
Number of successful extensions: 1778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)