Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K13
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81564-2|CAB04568.1|  189|Caenorhabditis elegans Hypothetical pr...    56   4e-08
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    30   2.7  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    30   2.7  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z81564-2|CAB04568.1|  189|Caenorhabditis elegans Hypothetical
           protein K05C4.2 protein.
          Length = 189

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +2

Query: 197 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 376
           M+SRG V   GT+G DF++R++VA  Y  SA  KS LK+    H ++ + M  K+ +++L
Sbjct: 1   MSSRG-VRAAGTDGTDFQNRQRVAQHYQESAQYKSILKWFFVPHFLILVFMWLKVGSELL 59

Query: 377 -DKLDIFILEVEELQIPPPLWWEYIWC 454
                      + L +P    WEY+WC
Sbjct: 60  RTNFGWKNAFFDRLDMPSAYPWEYVWC 86


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 642 PPQNYHLHHHVTNISKHPHSSTIRSTIT 559
           P +++H HHH      H +SST+R T T
Sbjct: 310 PRRHHHGHHHHGTHHHHHYSSTVRPTTT 337


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 642 PPQNYHLHHHVTNISKHPHSSTIRSTIT 559
           P +++H HHH      H +SST+R T T
Sbjct: 310 PRRHHHGHHHHGTHHHHHYSSTVRPTTT 337


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 648 LYPPQNYHLHHHVTNISKHPH 586
           +YP  ++H H+ + ++ +HPH
Sbjct: 24  VYPSHHHHQHYQLPHLQQHPH 44


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 648 LYPPQNYHLHHHVTNISKHPH 586
           +YP  ++H H+ + ++ +HPH
Sbjct: 24  VYPSHHHHQHYQLPHLQQHPH 44


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 648 LYPPQNYHLHHHVTNISKHPH 586
           +YP  ++H H+ + ++ +HPH
Sbjct: 24  VYPSHHHHQHYQLPHLQQHPH 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,389,009
Number of Sequences: 27780
Number of extensions: 326767
Number of successful extensions: 776
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)