Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K04
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123974-1|BAC85739.1|  322|Homo sapiens protein ( Homo sapiens ...    34   0.60 
Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    32   2.4  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    32   2.4  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.6  

>AK123974-1|BAC85739.1|  322|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41980 fis, clone SMINT2007391. ).
          Length = 322

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
 Frame = -2

Query: 738 AMRKRHAXPKGERRTVSGKRQGXNRR---AHEG----AXQGETPGIFIVLSGFATSDLSV 580
           A R+R A P G+RR  +  R     R   AH+G          P   +  +G A S   V
Sbjct: 185 AARERGAAPPGDRRVTARPRAAVTSREAHAHKGWGVRGGSSAAPAQLLREAGSAPSGRGV 244

Query: 579 DFCDARQGGGAYGKTPATRPFYGSWP 502
            F   R GG  + +  A  P   SWP
Sbjct: 245 SF-PRRAGGPLFPRAAAEAPPSASWP 269


>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -2

Query: 708 GERRTVSGKRQGXNRRAHEGAXQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPA 529
           GE R + G  +G  + +      G++P    +  GFA+ +   +F +A  GG +   +P 
Sbjct: 571 GEER-LKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPY 629

Query: 528 TRPFYGSWP 502
           + P Y S P
Sbjct: 630 STPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -2

Query: 708 GERRTVSGKRQGXNRRAHEGAXQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPA 529
           GE R + G  +G  + +      G++P    +  GFA+ +   +F +A  GG +   +P 
Sbjct: 572 GEER-LKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPY 630

Query: 528 TRPFYGSWP 502
           + P Y S P
Sbjct: 631 STPSYLSVP 639


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -2

Query: 564 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 448
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,696,779
Number of Sequences: 237096
Number of extensions: 2482935
Number of successful extensions: 7031
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7029
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)