Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K03
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0154 + 20707811-20708210,20709252-20709523                       32   0.51 
12_01_0027 - 225670-225870,225989-226126,226315-226392,226523-22...    32   0.68 
11_01_0027 - 199196-199396,199514-199651,200207-200284,200419-20...    32   0.68 
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821...    32   0.68 
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069...    31   1.6  
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273...    30   2.7  
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657...    29   6.3  
01_07_0117 + 41171919-41172395                                         29   6.3  
11_04_0227 + 15094941-15095445,15095773-15095865,15096209-150963...    28   8.3  
07_03_1782 + 29477748-29478169,29478257-29478413,29478518-294786...    28   8.3  
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080...    28   8.3  

>11_06_0154 + 20707811-20708210,20709252-20709523
          Length = 223

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = -3

Query: 815 GGEPRGLGGVPRVHGPGHAGRAAW 744
           GGE R LG  P  HG G AG A W
Sbjct: 83  GGESRRLGWEPTRHGAGDAGEAEW 106


>12_01_0027 -
           225670-225870,225989-226126,226315-226392,226523-226708,
           226853-226945,227797-227863,228660-228964
          Length = 355

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 574 HLVAATEVVESVAGQLFRRQKRNGPL-IKGFQTFLFTTHVGHIRKEVECVV 425
           HLV AT+    V G+ +R  +++GPL +  F   L +  V H   +V  VV
Sbjct: 285 HLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDVGDVV 335


>11_01_0027 -
           199196-199396,199514-199651,200207-200284,200419-200604,
           200754-200846,201665-201731,202374-202675
          Length = 354

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 574 HLVAATEVVESVAGQLFRRQKRNGPL-IKGFQTFLFTTHVGHIRKEVECVV 425
           HLV AT+    V G+ +R  +++GPL +  F   L +  V H   +V  VV
Sbjct: 284 HLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDVGDVV 334


>05_04_0347 +
           20479682-20479753,20480136-20480813,20481143-20482195,
           20482345-20482406,20482491-20482541,20482635-20482719,
           20483253-20483342,20483472-20483563,20483704-20483728
          Length = 735

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
 Frame = +3

Query: 633 PIIGDGRPSVPLYENKCMPTLGERRPLSVE------TNVGPVRPRSPPRMP-----GPVH 779
           P+  D     P     C P+  ERRP + E        V P RP +P R P      PVH
Sbjct: 318 PVTRDSSRKAPEVATMCRPSTAERRPATRELAPKQANTVVPCRPSTPNRRPMTRELAPVH 377

Query: 780 ARYST 794
           +  +T
Sbjct: 378 SSIAT 382


>09_06_0242 -
           21806370-21806483,21806574-21806660,21806865-21806917,
           21806999-21807140,21807406-21807501,21808617-21808785,
           21808859-21808939,21809032-21809106,21810322-21810387,
           21811013-21811158,21811898-21812344
          Length = 491

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +3

Query: 693 LGERRPLSVETNVGPVRPRSPPRMPGPVHARYSTEAARLATFKDWPRCMPQKPEE 857
           L   R L V    GP R R P RMP P+HA  +         + WP  +   P E
Sbjct: 10  LQAERCLLVGVGAGPRRHRLPLRMPPPLHAPPALLLLPHRRRRRWPPAVRASPGE 64


>08_02_0210 +
           14324539-14324609,14324735-14325740,14325838-14327390,
           14327473-14327601,14328345-14328510
          Length = 974

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 638 HRRWAPQCPFVRKQMYANAGGEAAAVGRDECGASAAT 748
           HR  +P+CP   +++  N+  +   +G   C A A+T
Sbjct: 862 HRATSPKCPLNSQKIMKNSDKQGRPLGSTSCAAGAST 898


>10_07_0132 +
           13263577-13263732,13265391-13265456,13265607-13265705,
           13267020-13267084,13267210-13267294,13267389-13267422,
           13267539-13267642,13268085-13268408,13269090-13269605
          Length = 482

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 651 RPSVPLYENKCMPTLGERRP 710
           +P V LY +KC  +LG RRP
Sbjct: 76  QPCVGLYSDKCTSSLGRRRP 95


>01_07_0117 + 41171919-41172395
          Length = 158

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 823 SLKVASRAASVEY-RACTGPGMRGGLRGRTGPTFVSTDSGRLSPSV 689
           +L+ ++ +A+ EY R  TGPG  GG      P  V   +  LSP +
Sbjct: 28  ALRTSAISAAPEYPRLPTGPGHGGGRHAAPAPAAVLPPAPALSPDI 73


>11_04_0227 +
           15094941-15095445,15095773-15095865,15096209-15096308,
           15096799-15096874,15099906-15100017,15100924-15101012,
           15101137-15101223,15101623-15101678,15102114-15102462
          Length = 488

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 642 GDGRPSVPLYENKCMPTLGERRPLSVETNVGPVRPRSPPRMPGP 773
           G+GR   P Y    + +L    PL +     P+ P +PPR+P P
Sbjct: 415 GEGRMLHP-YHRLPVGSLLPLHPLDLVEGRAPLPPATPPRVPSP 457


>07_03_1782 +
           29477748-29478169,29478257-29478413,29478518-29478610,
           29478753-29478938,29479107-29479187,29479788-29479925,
           29480044-29480208
          Length = 413

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 574 HLVAATEVVESVAGQLFRRQKRNGP 500
           HL+ ATE  + V G+ +R   ++GP
Sbjct: 355 HLIEATEAAKGVMGKYYREPDKSGP 379


>01_06_1791 -
           39907362-39907453,39907682-39907753,39907941-39908045,
           39908212-39908302,39908787-39908849,39909448-39909497,
           39909632-39909716
          Length = 185

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 693 LGERRPLSVETNVGPVRPRSPPRMPGPVHARYSTE 797
           +GE+R L +   +G     SPP++PG     + TE
Sbjct: 107 VGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTE 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,839,343
Number of Sequences: 37544
Number of extensions: 478319
Number of successful extensions: 1565
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)