Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_K02
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457148-1|CAG33429.1| 221|Homo sapiens LOC55974 protein. 39 0.028
BC009621-1|AAH09621.1| 167|Homo sapiens RAG1AP1 protein protein. 39 0.028
BC005943-1|AAH05943.1| 221|Homo sapiens recombination activatin... 39 0.028
AL691442-8|CAI15323.1| 221|Homo sapiens recombination activatin... 39 0.028
AL691442-7|CAI15322.1| 167|Homo sapiens recombination activatin... 39 0.028
AF126023-1|AAF17232.1| 221|Homo sapiens stromal cell protein pr... 39 0.028
BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm a... 34 0.80
BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm a... 34 0.80
AL691442-9|CAI15324.1| 166|Homo sapiens recombination activatin... 34 0.80
AL691442-6|CAI15321.1| 156|Homo sapiens recombination activatin... 34 0.80
AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein. 34 0.80
AF126024-1|AAF17233.1| 179|Homo sapiens stromal cell protein is... 34 0.80
AY286318-1|AAQ23050.1| 231|Homo sapiens spermatid-specific link... 30 9.9
>CR457148-1|CAG33429.1| 221|Homo sapiens LOC55974 protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 249 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 428
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 429 IQVNMFGLALNIIYVMIYFNY 491
I VN G AL +Y++ Y +Y
Sbjct: 70 IVVNTVGAALQTLYILAYLHY 90
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 AGAVSAALIGYAQ----TEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 699
A + L+GY +P+ + + F + SPL L ++IQ KST+ +
Sbjct: 102 ATLLGVLLLGYGYFWLLVPNPEARLQQLALFCSVFTISMYLSPLADLAKVIQTKSTQCLS 161
Query: 700 FPIILSGTVVTFMW 741
+P+ ++ + + W
Sbjct: 162 YPLTIATLLTSASW 175
>BC009621-1|AAH09621.1| 167|Homo sapiens RAG1AP1 protein protein.
Length = 167
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 249 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 428
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 429 IQVNMFGLALNIIYVMIYFNY 491
I VN G AL +Y++ Y +Y
Sbjct: 70 IVVNTVGAALQTLYILAYLHY 90
>BC005943-1|AAH05943.1| 221|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 249 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 428
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 429 IQVNMFGLALNIIYVMIYFNY 491
I VN G AL +Y++ Y +Y
Sbjct: 70 IVVNTVGAALQTLYILAYLHY 90
Score = 33.9 bits (74), Expect = 0.80
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 AGAVSAALIGYAQ----TEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 699
A + L+GY +P+ + G + F + SPL L ++IQ KST+ +
Sbjct: 102 ATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLS 161
Query: 700 FPIILSGTVVTFMW 741
+P+ ++ + + W
Sbjct: 162 YPLTIATLLTSASW 175
>AL691442-8|CAI15323.1| 221|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 249 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 428
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 429 IQVNMFGLALNIIYVMIYFNY 491
I VN G AL +Y++ Y +Y
Sbjct: 70 IVVNTVGAALQTLYILAYLHY 90
Score = 33.9 bits (74), Expect = 0.80
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 AGAVSAALIGYAQ----TEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 699
A + L+GY +P+ + G + F + SPL L ++IQ KST+ +
Sbjct: 102 ATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLS 161
Query: 700 FPIILSGTVVTFMW 741
+P+ ++ + + W
Sbjct: 162 YPLTIATLLTSASW 175
>AL691442-7|CAI15322.1| 167|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 167
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 249 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 428
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 429 IQVNMFGLALNIIYVMIYFNY 491
I VN G AL +Y++ Y +Y
Sbjct: 70 IVVNTVGAALQTLYILAYLHY 90
>AF126023-1|AAF17232.1| 221|Homo sapiens stromal cell protein
protein.
Length = 221
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 249 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 428
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVRFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 429 IQVNMFGLALNIIYVMIYFNY 491
I VN G AL +Y++ Y +Y
Sbjct: 70 IVVNTVGAALQTLYILAYLHY 90
Score = 33.9 bits (74), Expect = 0.80
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 AGAVSAALIGYAQ----TEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 699
A + L+GY +P+ + G + F + SPL L ++IQ KST+ +
Sbjct: 102 ATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLS 161
Query: 700 FPIILSGTVVTFMW 741
+P+ ++ + + W
Sbjct: 162 YPLTIATLLTSASW 175
>BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 33.9 bits (74), Expect = 0.80
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 317 HIQAGQHSRDRHHAVPRRCCYDHPELAIWLHTP*RHHDSSQHVRS 451
H+ QH +HH VP R H + + H RHH++ QH +S
Sbjct: 198 HLSGLQHDESQHHQVPHRGWPHHHQ--VHHHGRSRHHEAHQHGKS 240
>BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 33.9 bits (74), Expect = 0.80
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 317 HIQAGQHSRDRHHAVPRRCCYDHPELAIWLHTP*RHHDSSQHVRS 451
H+ QH +HH VP R H + + H RHH++ QH +S
Sbjct: 198 HLSGLQHDESQHHQVPHRGWPHHHQ--VHHHGRSRHHEAHQHGKS 240
>AL691442-9|CAI15324.1| 166|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 166
Score = 33.9 bits (74), Expect = 0.80
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 AGAVSAALIGYAQ----TEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 699
A + L+GY +P+ + G + F + SPL L ++IQ KST+ +
Sbjct: 47 ATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLS 106
Query: 700 FPIILSGTVVTFMW 741
+P+ ++ + + W
Sbjct: 107 YPLTIATLLTSASW 120
>AL691442-6|CAI15321.1| 156|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 156
Score = 33.9 bits (74), Expect = 0.80
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 AGAVSAALIGYAQ----TEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 699
A + L+GY +P+ + G + F + SPL L ++IQ KST+ +
Sbjct: 37 ATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLS 96
Query: 700 FPIILSGTVVTFMW 741
+P+ ++ + + W
Sbjct: 97 YPLTIATLLTSASW 110
>AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein.
Length = 780
Score = 33.9 bits (74), Expect = 0.80
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 317 HIQAGQHSRDRHHAVPRRCCYDHPELAIWLHTP*RHHDSSQHVRS 451
H+ QH +HH VP R H + + H RHH++ QH +S
Sbjct: 198 HLSGLQHDESQHHQVPHRGWPHHHQ--VHHHGRSRHHEAHQHGKS 240
>AF126024-1|AAF17233.1| 179|Homo sapiens stromal cell protein
isoform protein.
Length = 179
Score = 33.9 bits (74), Expect = 0.80
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 AGAVSAALIGYAQ----TEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMP 699
A + L+GY +P+ + G + F + SPL L ++IQ KST+ +
Sbjct: 60 ATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLS 119
Query: 700 FPIILSGTVVTFMW 741
+P+ ++ + + W
Sbjct: 120 YPLTIATLLTSASW 133
>AY286318-1|AAQ23050.1| 231|Homo sapiens spermatid-specific linker
histone H1-like protein protein.
Length = 231
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 410 YVTILQVQDGHNNTSEERHDADPA-SAALLVYVPAYETAGEHLPN 279
+VT+L GH ERH A + SA L Y + AG+ +P+
Sbjct: 55 WVTVLDPLSGHTGREAERHFATVSISAVELKYCHGWRPAGQRVPS 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,991,424
Number of Sequences: 237096
Number of extensions: 2589943
Number of successful extensions: 6691
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6687
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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