Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K02
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045645-2|AAC02609.1|  299|Caenorhabditis elegans Hypothetical ...    51   1e-06
Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical pr...    46   4e-05
AF016447-9|AAG24009.1|  233|Caenorhabditis elegans Hypothetical ...    45   6e-05
AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical ...    41   0.001
AF039047-4|AAB94225.1|  224|Caenorhabditis elegans Hypothetical ...    37   0.022
AL117202-1|CAB55091.2|  454|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z70755-4|CAA94783.2|  239|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>AF045645-2|AAC02609.1|  299|Caenorhabditis elegans Hypothetical
           protein K02D7.5 protein.
          Length = 299

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 30/89 (33%), Positives = 45/89 (50%)
 Frame = +3

Query: 228 ILQPYKEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGY 407
           +L+   +++   A   TI   F G  IC  I +QG+   I  +PFL GV+     L+YG 
Sbjct: 1   MLEVVLQVLSISAITTTIALFFCGIPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGL 60

Query: 408 ILRDDTMIQVNMFGLALNIIYVMIYFNYS 494
           +  D  MI VN+ G+A    Y + +  YS
Sbjct: 61  LKMDYVMIIVNVVGVACMAFYCVFFLIYS 89



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +1

Query: 604 GTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMW 741
           G I   F      +PL GL  +++N+    +P P+ ++  +V+  W
Sbjct: 123 GVICMTFNIMNFGAPLAGLGVVLKNREVSTLPLPMCVANFLVSSQW 168


>Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical
           protein C06G8.1 protein.
          Length = 355

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = +3

Query: 249 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 428
           ++  +A F T+G  F G  IC  I+K+  T+ I   PFL GVV     + YG++  D T+
Sbjct: 14  LLSILAFFTTVGLFFCGIPICRQIWKRKDTKEISGAPFLMGVVGGCCWMTYGWLKNDGTV 73

Query: 429 IQVNMFGLALNIIYVMIYF 485
             V    + L   Y + Y+
Sbjct: 74  KWVTGCQVILYTTYTIFYW 92



 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +1

Query: 640 ASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMW 741
           A+PL G++ +I+  +T  +P P+ ++  +V+  W
Sbjct: 143 AAPLGGIRVVIRRWATSTLPLPLCIANFLVSTEW 176


>AF016447-9|AAG24009.1|  233|Caenorhabditis elegans Hypothetical
           protein C54F6.4 protein.
          Length = 233

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 306 ICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYF 485
           IC  IY+QG    I   PFL G ++    L+YG++  D  +I +N  G+ + +   M + 
Sbjct: 17  ICLQIYRQGHVGDISGFPFLMGTLVLPFWLRYGFLRNDVMLISINCAGIPIAVFNAMFFL 76

Query: 486 NYSQ 497
            +S+
Sbjct: 77  YFSK 80


>AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical
           protein Y39A1A.8 protein.
          Length = 225

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/72 (34%), Positives = 33/72 (45%)
 Frame = +3

Query: 276 TIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLA 455
           T+     G  IC  I  +GS+ G    PFL   +   L +QYG +  DD +   N  G  
Sbjct: 21  TVAFFLCGLQICHRIKTRGSSEGTSPAPFLLSFLSCGLFIQYGLLKDDDVITYCNGIGCF 80

Query: 456 LNIIYVMIYFNY 491
           L   Y+M YF Y
Sbjct: 81  LQACYLM-YFYY 91



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +1

Query: 535 GAVSAALIGYAQTEDPKLVETRF-GTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFPII 711
           G +   +   A + +  L +T + G          +A+PLF + ++++NKS+E +P P+ 
Sbjct: 108 GIIGIVVYWVAHSTNSHLTKTTYVGNYCIFLNICSVAAPLFDIGKVVRNKSSESLPLPLC 167

Query: 712 LSGTVVTFMW 741
           ++  VV   W
Sbjct: 168 VACFVVCLQW 177



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +2

Query: 776 LVVQNVVALLLCGSQLSLFVIYP 844
           ++V NV+A ++   QLSLF+IYP
Sbjct: 189 ILVPNVIATVISILQLSLFIIYP 211


>AF039047-4|AAB94225.1|  224|Caenorhabditis elegans Hypothetical
           protein K11D12.5 protein.
          Length = 224

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +3

Query: 276 TIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLA 455
           +IG  F   F+  D +K+G+  G   + F+  +++    L++GY+  D T I +N   L 
Sbjct: 14  SIGFTFLPMFMVLDWHKRGTADGFSSVNFVLPMLVQSFWLRHGYMTNDQTNIIINSINLV 73

Query: 456 LNIIYVMIYFNY 491
               YV  +  Y
Sbjct: 74  FFAFYVSAFAYY 85


>AL117202-1|CAB55091.2|  454|Caenorhabditis elegans Hypothetical
           protein Y47D3A.1 protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 553 LIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEI 669
           L+   + +DPKLVE    +IIT   F +  + +F  KE+
Sbjct: 208 LLWLNKQKDPKLVENFINSIITCSKFTIFLTSIFEKKEL 246


>Z70755-4|CAA94783.2|  239|Caenorhabditis elegans Hypothetical
           protein K06A4.4 protein.
          Length = 239

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = +3

Query: 354 MPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYFNY 491
           +P++  V+ + L L+Y   LRD  +I +  + +++ + +V+    Y
Sbjct: 60  IPYICAVIGSALWLRYSIFLRDTKLILLQTYAVSMQLFFVIALIFY 105



 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +2

Query: 773 FLVVQNVVALLLCGSQLSLFVIYPSXXKAR 862
           ++++ NV+   + GS LS+F +YP+  K +
Sbjct: 199 YMLLANVIFFCMDGSLLSMFFVYPTEKKKK 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,592,081
Number of Sequences: 27780
Number of extensions: 387152
Number of successful extensions: 927
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)