Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_J24
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306...    29   3.7  
03_02_0507 - 8999902-9000649,9001106-9001225,9001314-9001394,900...    29   4.9  
03_02_0557 + 9450212-9450346,9450553-9450633,9450768-9451114,945...    29   6.5  
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558...    28   8.6  

>06_02_0046 +
           10928708-10928798,10929997-10930077,10930567-10930685,
           10931275-10931894,10931992-10933184,10933280-10933359,
           10933751-10933846,10933931-10934004,10936007-10936151,
           10936323-10936487
          Length = 887

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +1

Query: 382 TQSIEERSENSTT---SNVENDNTEEMERSQNTDN 477
           T SI++  EN TT   S +E+DN E+M+     D+
Sbjct: 416 TSSIQKSEENDTTTVPSKIESDNDEDMDVDMEVDD 450


>03_02_0507 -
           8999902-9000649,9001106-9001225,9001314-9001394,
           9001591-9001613
          Length = 323

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 406 ENSTTSNVENDNTEEMERSQNTDNIRRLSRKRKRE 510
           ++S  SN E+D+ E   R +    +R+  R+R+RE
Sbjct: 212 DSSDESNSESDDKESKRRRKEEKRLRKEERRRRRE 246


>03_02_0557 +
           9450212-9450346,9450553-9450633,9450768-9451114,
           9451345-9451945,9452206-9452239,9452514-9452577,
           9452909-9453325,9453439-9453523,9453773-9453831,
           9453931-9454043,9456407-9456509,9456597-9456654,
           9456781-9456834,9456922-9457131,9457254-9457312,
           9457436-9457495,9457709-9457802,9458366-9458506,
           9458562-9458741
          Length = 964

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 222 CIACEKAIHTRCLNQYLEKIK 284
           C  CE+A+H +C N  L+K K
Sbjct: 697 CNQCERALHVKCYNNGLQKPK 717


>02_05_0308 -
           27754340-27754634,27755591-27755696,27755781-27755855,
           27756039-27757410
          Length = 615

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -1

Query: 204 FNQDSMSFINTHNTATGYSS*KISVNFTVRHGWLKIFSLCLFIKFRSGL 58
           FNQ  +SF +TH  +   S+ K  +         +IFSL L ++ + G+
Sbjct: 456 FNQHHISFKSTHRWSYDESNCKYHLIIVFERAPTEIFSLSLLVQLQFGM 504


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,216,771
Number of Sequences: 37544
Number of extensions: 283142
Number of successful extensions: 658
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)