Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_J19
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.006
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 0.14
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 0.14
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.50
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.81
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.81
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.83
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 6.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.2
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 28 8.2
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 8.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/101 (25%), Positives = 31/101 (30%)
Frame = +2
Query: 542 PPXXPPKKXXXXXXGGGXXFFPPXGGXXXXPQKGGXXXKXSFXPXPXKXXKXXXGXXGFF 721
PP PP K G G PP G P+ G + P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 722 XPXGPPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPPXXP 844
P PP + PP G PPP + +PP P
Sbjct: 297 PPPPPP----PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/96 (26%), Positives = 28/96 (29%)
Frame = +1
Query: 535 GPPPPXPPXKXXXXXXGGGGXXFSPXGGGXXXTXKRGXXXXXIFXPXXXKXPKKXXGXXX 714
G PPP PP K G G P G + G P P G
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSP 289
Query: 715 XFFXXGAPPXKKKKXXXXXWGGAPPPXNXKXXGFPP 822
G+PP G PPP + G PP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPP---QAGGSPP 322
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 292 GXPXPPPXGGXPPP 251
G P PPP GG PPP
Sbjct: 278 GSPPPPPAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/101 (25%), Positives = 31/101 (30%)
Frame = +2
Query: 542 PPXXPPKKXXXXXXGGGXXFFPPXGGXXXXPQKGGXXXKXSFXPXPXKXXKXXXGXXGFF 721
PP PP K G G PP G P+ G + P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 722 XPXGPPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPPXXP 844
P PP + PP G PPP + +PP P
Sbjct: 318 PPPPPP----PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/96 (26%), Positives = 28/96 (29%)
Frame = +1
Query: 535 GPPPPXPPXKXXXXXXGGGGXXFSPXGGGXXXTXKRGXXXXXIFXPXXXKXPKKXXGXXX 714
G PPP PP K G G P G + G P P G
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSP 310
Query: 715 XFFXXGAPPXKKKKXXXXXWGGAPPPXNXKXXGFPP 822
G+PP G PPP + G PP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPP---QAGGSPP 343
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 292 GXPXPPPXGGXPPP 251
G P PPP GG PPP
Sbjct: 299 GSPPPPPAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/101 (25%), Positives = 31/101 (30%)
Frame = +2
Query: 542 PPXXPPKKXXXXXXGGGXXFFPPXGGXXXXPQKGGXXXKXSFXPXPXKXXKXXXGXXGFF 721
PP PP K G G PP G P+ G + P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 722 XPXGPPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPPXXP 844
P PP + PP G PPP + +PP P
Sbjct: 303 PPPPPP----PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/96 (26%), Positives = 28/96 (29%)
Frame = +1
Query: 535 GPPPPXPPXKXXXXXXGGGGXXFSPXGGGXXXTXKRGXXXXXIFXPXXXKXPKKXXGXXX 714
G PPP PP K G G P G + G P P G
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSP 295
Query: 715 XFFXXGAPPXKKKKXXXXXWGGAPPPXNXKXXGFPP 822
G+PP G PPP + G PP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPP---QAGGSPP 328
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 292 GXPXPPPXGGXPPP 251
G P PPP GG PPP
Sbjct: 284 GSPPPPPAGGSPPP 297
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +2
Query: 671 PXPXKXXKXXXGXXGFFXPXGPPRXKKKKXXPP-FGG--XPPPPXXKKXXXSPXKTPPXX 841
P P G G P PP + PP GG PPPP + P PP
Sbjct: 308 PPPPPPPGRTPGPPGM--PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY 365
Query: 842 PXFXP 856
P P
Sbjct: 366 PSAGP 370
Score = 27.5 bits (58), Expect(2) = 0.14
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 773 GGXPPPPXXKKXXXSPXKTPPXXPXFXP 856
GG PPPP + P PP P P
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 25.4 bits (53), Expect(2) = 0.14
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 713 GFFXPXGPPRXKKKKXXPPFGGXPPPP 793
G + P PP + P G PPPP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPP 330
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +2
Query: 671 PXPXKXXKXXXGXXGFFXPXGPPRXKKKKXXPP-FGG--XPPPPXXKKXXXSPXKTPPXX 841
P P G G P PP + PP GG PPPP + P PP
Sbjct: 298 PPPPPPPGRTPGPPGM--PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY 355
Query: 842 PXFXP 856
P P
Sbjct: 356 PSAGP 360
Score = 27.5 bits (58), Expect(2) = 0.14
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 773 GGXPPPPXXKKXXXSPXKTPPXXPXFXP 856
GG PPPP + P PP P P
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 25.4 bits (53), Expect(2) = 0.14
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 713 GFFXPXGPPRXKKKKXXPPFGGXPPPP 793
G + P PP + P G PPPP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPP 320
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 410 PXXXXPKKXXXPPFXXKKXFXPPXFGGGXXPXXTXFFXFXGPXPPPXXGXPPP 252
P PK P F PP G G P F P PPP G PP
Sbjct: 54 PGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -3
Query: 422 NFFXPXXXXPKKXXXPPFXXKKXFXPPXFGGGXXPXXTXFFXFXGPXPPPXXGXPPP 252
+FF P PP PP F GG P P PPP G PPP
Sbjct: 62 SFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGI--PPPPPMFGAPPP 116
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = -1
Query: 412 PPXXXXPK-KXXXPLFXKKXFFXPXXSXGXXAXXXQXFFXXGXPXPPPXGGXPPPXP 245
PP PK P F P G F P PP GG PPP P
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 292 GXPXPPPXGGXPPPXP 245
G P PPP G PPP P
Sbjct: 103 GIPPPPPMFGAPPPPP 118
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 731 GPPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPPXXPXF 850
GPP PP G PPPP P PP F
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 286 PXPPPXGGXPPPXP 245
P PPP GG PPP P
Sbjct: 760 PPPPPPGGCPPPPP 773
Score = 26.6 bits (56), Expect(2) = 0.81
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 292 GXPXPPPXGGXPP 254
G P PPP GG PP
Sbjct: 725 GPPPPPPPGGLPP 737
Score = 23.4 bits (48), Expect(2) = 0.81
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 280 PPPXGGXPPPXP 245
PP GG PPP P
Sbjct: 752 PPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 731 GPPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPPXXPXF 850
GPP PP G PPPP P PP F
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 286 PXPPPXGGXPPPXP 245
P PPP GG PPP P
Sbjct: 760 PPPPPPGGCPPPPP 773
Score = 26.6 bits (56), Expect(2) = 0.81
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 292 GXPXPPPXGGXPP 254
G P PPP GG PP
Sbjct: 725 GPPPPPPPGGLPP 737
Score = 23.4 bits (48), Expect(2) = 0.81
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 280 PPPXGGXPPPXP 245
PP GG PPP P
Sbjct: 752 PPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 731 GPPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPPXXPXF 850
GPP PP G PPPP P PP F
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 286 PXPPPXGGXPPPXP 245
P PPP GG PPP P
Sbjct: 343 PPPPPPGGCPPPPP 356
Score = 26.6 bits (56), Expect(2) = 0.83
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 292 GXPXPPPXGGXPP 254
G P PPP GG PP
Sbjct: 308 GPPPPPPPGGLPP 320
Score = 23.4 bits (48), Expect(2) = 0.83
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 280 PPPXGGXPPPXP 245
PP GG PPP P
Sbjct: 335 PPISGGPPPPPP 346
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 731 GPPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPP 835
G P+ KK P PPPP P K PP
Sbjct: 35 GKPKKKKDVSGAPSAESPPPPPPAPKVPEPPKAPP 69
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +3
Query: 735 PPXXKKKKXXXXLGGXPPPXXXKXXXXPPXKPXPXXPXFXPPXXKXXXXXXXPXGE 902
PP +K PPP PP P P P PP + P E
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 538 PPPPXPPXKXXXXXXGGGGXXFSPXGGGXXXTXKRG 645
PPPP PP GGG GGG + G
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 538 PPPPXPPXKXXXXXXGGGGXXFSPXGGGXXXTXKRG 645
PPPP PP GGG GGG + G
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 734 PPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPP 835
PP K PP PPPP K K PP
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPP 208
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/86 (24%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = -2
Query: 792 GGGGXPPXGGXXXXXXXRGGPXGKKXPXXPXXFFXXFXGXGXK-DXXXXXPPFXGXXXSP 616
G GG P GG +GGP G P P G + P
Sbjct: 188 GQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPKSHGRSNMIEGVQRLLQIFKSDNGP 247
Query: 615 PXGGKXXXPPPXXXXXXFXGGXXGGG 538
P G PP G GG
Sbjct: 248 PGGTAGRDYPPQQGPGGMFGSYGDGG 273
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/86 (24%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = -2
Query: 792 GGGGXPPXGGXXXXXXXRGGPXGKKXPXXPXXFFXXFXGXGXK-DXXXXXPPFXGXXXSP 616
G GG P GG +GGP G P P G + P
Sbjct: 468 GQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPKSHGRSNMIEGVQRLLQIFKSDNGP 527
Query: 615 PXGGKXXXPPPXXXXXXFXGGXXGGG 538
P G PP G GG
Sbjct: 528 PGGTAGRDYPPQQGPGGMFGSYGDGG 553
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = -2
Query: 714 PXXPXXFFXXFXGXGXKDXXXXXPPFXGXXXSPPXGGKXXXPPPXXXXXXFXGGXXGGG 538
P P F F P F P PPP F GG GGG
Sbjct: 682 PPQPPVFVQQFVAPQFVQFVAPQPQFVAVAPQPQFVAVAPVPPPVAPAVAFAGGGGGGG 740
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 734 PPRXKKKKXXPPFGGXPPPPXXKKXXXSPXKTPPXXPXFXPXXXK 868
P + K PP P P K SP K P P P K
Sbjct: 840 PAKPSTKTDAPPVSVKKPEPVSKPKEPSPKKAEPNSPVVPPTPVK 884
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,575,298
Number of Sequences: 27780
Number of extensions: 304517
Number of successful extensions: 2235
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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