Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_J15
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 173 1e-43
Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 132 3e-31
U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical pr... 132 4e-31
Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical ... 71 1e-12
AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical ... 60 3e-09
AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical ... 59 4e-09
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 5.9
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 173 bits (421), Expect = 1e-43
Identities = 83/150 (55%), Positives = 108/150 (72%), Gaps = 2/150 (1%)
Frame = +1
Query: 187 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 366
KN G+DV L YKG V IIVNVASQCGLT NY QL EL + Y + GL +LAFPCNQF
Sbjct: 10 KNANGDDVSLSDYKGKVLIIVNVASQCGLTNKNYTQLKELLDVY-KKDGLEVLAFPCNQF 68
Query: 367 AGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKYLKHKQGGTLGSFIKWNF 540
AGQEP +I F ++ K KF+ LF+K+DVNGD SPL+K+LK+++GG + IKWNF
Sbjct: 69 AGQEPSCEIDIQAFVAD-KFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGGFMFDAIKWNF 127
Query: 541 TKFIINKDGVPVERHGPNTDPLDLVKSLEK 630
TKF++ +DG ++R GP TDP D+ K +++
Sbjct: 128 TKFLVGRDGKIIKRFGPTTDPKDMEKDIKE 157
>Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical
protein R05H10.5 protein.
Length = 163
Score = 169 bits (411), Expect = 2e-42
Identities = 80/149 (53%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
Frame = +1
Query: 187 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 366
KN +GED L Y+G V IIVNVASQCGLT +NY Q EL + Y + GL +LAFPCNQF
Sbjct: 10 KNAQGEDTPLSNYQGKVLIIVNVASQCGLTNSNYNQFKELLDVY-KKDGLEVLAFPCNQF 68
Query: 367 AGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKYLKHKQGGTLGSFIKWNF 540
GQEP +I F ++ K KF+ LF+K+DVNGDN +PL+K+LK ++GG L IKWNF
Sbjct: 69 GGQEPSCEIDIAAFVAD-KFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGGFLVDAIKWNF 127
Query: 541 TKFIINKDGVPVERHGPNTDPLDLVKSLE 627
TKF++ +DG ++R P T+P D+ K +E
Sbjct: 128 TKFLVGRDGHVIKRFSPTTEPKDMKKDIE 156
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 132 bits (319), Expect = 3e-31
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
Frame = +1
Query: 187 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 366
KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+ AFPCNQF
Sbjct: 37 KNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVAAFPCNQF 95
Query: 367 AGQEPGNPEEIVCFA-SERKVKFDLFEKVDVNGDNASPLWKYLKHKQGGTLGSFIKWNFT 543
QEP +I+ F S D++ K++VNG N PLWK+LK ++G +L + I WNF+
Sbjct: 96 EKQEPETEGKILDFVKSSYTYAPDMYSKIEVNGQNTHPLWKFLKKERGSSLSADIPWNFS 155
Query: 544 KFIINKDGVPVERHGPNTDPLDLVKSLEK 630
KF+++K+G V R+ + +P+DL + + +
Sbjct: 156 KFLVDKNGHVVGRYSHSVNPIDLEEEISR 184
>U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical
protein R03G5.5 protein.
Length = 193
Score = 132 bits (318), Expect = 4e-31
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 5/159 (3%)
Frame = +1
Query: 199 GEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQFAGQE 378
G+ V LD Y G V IIVNVAS CGLT +NYK+L L ++Y +GLR+ AFPCNQF Q
Sbjct: 43 GDLVSLDKYSGLVVIIVNVASYCGLTNSNYKELKSLNDKY-HLRGLRVAAFPCNQFGFQA 101
Query: 379 PGNPEEIVCFASER-KVKFDLFEKVDVNGD----NASPLWKYLKHKQGGTLGSFIKWNFT 543
+I F +E+ + DL+ KV VNG PLW +LK +QGGTL IKWNFT
Sbjct: 102 C----DINKFVNEKFSFEPDLYGKVTVNGGPLIGEEEPLWTFLKKEQGGTLFDAIKWNFT 157
Query: 544 KFIINKDGVPVERHGPNTDPLDLVKSLEKYW*KILAQTK 660
KF++N+ G V R GP+T+P KS E+ K+L + K
Sbjct: 158 KFLVNRQGKVVARFGPSTNP----KSFEEEIVKLLDENK 192
>Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical
protein C11E4.2 protein.
Length = 224
Score = 81.0 bits (191), Expect = 1e-15
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 23/158 (14%)
Frame = +1
Query: 187 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 366
+ ++GE L Y+G V ++VNVA+ C T Y N + E+Y +++GL ++AFPCNQF
Sbjct: 47 ETLQGEYTDLSQYRGKVILLVNVATFCAYT-QQYTDFNPMLEKY-QAQGLTLVAFPCNQF 104
Query: 367 AGQEPGNPEEIVCFASERK--------VKFDLFEKVDVNGDNASPLWKYLKH-------K 501
QEP E++ + + + ++ K+DVNGDN PL++++K K
Sbjct: 105 YLQEPAENHELMNGLTYVRPGNGWTPHQELHIYGKIDVNGDNHHPLYEFVKESCPQTVDK 164
Query: 502 QGGT--------LGSFIKWNFTKFIINKDGVPVERHGP 591
G T S I WNF KF+I+++G P R P
Sbjct: 165 IGKTDELMYNPVRPSDITWNFEKFLIDRNGQPRFRFHP 202
>Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical
protein C11E4.1 protein.
Length = 223
Score = 79.8 bits (188), Expect = 2e-15
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Frame = +1
Query: 187 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 366
+ ++GE L Y+G V ++VNVA+ C T Y N L E+Y +S+G ++AFPCNQF
Sbjct: 46 ETLQGEYTDLSQYRGQVLLMVNVATFCAYT-QQYTDFNPLIEKY-QSQGFTLIAFPCNQF 103
Query: 367 AGQEPGNPEEI---VCFAS-----ERKVKFDLFEKVDVNGDNASPLWKYLKH-------K 501
QEP E+ + + + ++ K+D NGDN P+++++K K
Sbjct: 104 YLQEPAENHELMNGIMYVRPGNGWKPHQNLHIYGKLDTNGDNQHPIYEFVKESCPQTVDK 163
Query: 502 QGGT--------LGSFIKWNFTKFIINKDGVPVERHGP 591
G T S I WNF KF+I+++G P R P
Sbjct: 164 IGKTDELMYNPIRASDITWNFEKFLIDRNGQPRFRFHP 201
>AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical
protein T09A12.2a protein.
Length = 125
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 187 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 366
KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+ AFPCNQF
Sbjct: 37 KNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVAAFPCNQF 95
Query: 367 AGQEPGNPEEIVCFA-SERKVKFDLFEKV 450
QEP +I+ F S D++ KV
Sbjct: 96 EKQEPETEGKILDFVKSSYTYAPDMYSKV 124
>AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical
protein F55A3.5 protein.
Length = 145
Score = 59.7 bits (138), Expect = 3e-09
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Frame = +1
Query: 340 ILAFPCNQFAGQEPGNPEEIVCFASERKVKFDLFEKVDVNGDNASPLWKYLKH------- 498
IL FPCNQ +E ++ F K + +++K+DVNG N PL+K LK
Sbjct: 33 ILVFPCNQSNNEESSWESDLPYFF---KYQPKIYQKIDVNGVNTDPLYKLLKKVNVVTLG 89
Query: 499 KQGGTLGSFIKWNFTKFIINKDGVPVERHGPNTDPLD 609
G LG I +NFTKF + KDG ++R T P D
Sbjct: 90 DSIGILGDSICYNFTKFFVGKDGHVIKRFCRTTLPKD 126
>AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical
protein Y94H6A.4 protein.
Length = 126
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +1
Query: 187 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 366
+ +KG+ L Y+G V ++VNVA+ C T Y N + ++Y + +GL I AFPCNQF
Sbjct: 46 ETLKGDYTDLSQYRGKVTLLVNVATFCAYT-QQYTDFNPILDKY-QKQGLVIAAFPCNQF 103
Query: 367 AGQEPGNPEEIV 402
QEP E++
Sbjct: 104 YLQEPAENHELL 115
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical
protein C41A3.1 protein.
Length = 7829
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 232 HVCIIVNVASQCGLTAN-NYKQLNELYEQYGESKGLRILAFPCNQFAGQEPGNPEEIVCF 408
+ C I+ + L +Y + N L+ + L++ QF Q E+I+
Sbjct: 389 NACAIIEKPEKPSLVQKESYAESNVLFLSAKSHESLKLQIEEYTQFMAQSDSAMEDILYT 448
Query: 409 ASERKVKFD 435
+ERK K+D
Sbjct: 449 VNERKTKYD 457
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,752,871
Number of Sequences: 27780
Number of extensions: 362233
Number of successful extensions: 891
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -