Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_J10
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040946-1|AAH40946.1| 229|Homo sapiens CWC15 homolog (S. cerev... 85 4e-16
BC032629-1|AAH32629.1| 138|Homo sapiens CWC15 protein protein. 85 4e-16
BC006975-1|AAH06975.1| 139|Homo sapiens Unknown (protein for IM... 85 4e-16
AJ250393-1|CAB96541.1| 229|Homo sapiens hypothetical protein pr... 85 4e-16
AF110775-1|AAF14858.1| 229|Homo sapiens adrenal gland protein A... 85 4e-16
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 30 9.6
AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive dom... 30 9.6
AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive dom... 30 9.6
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 30 9.6
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 30 9.6
AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive dom... 30 9.6
AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive dom... 30 9.6
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 30 9.6
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 30 9.6
AF227899-1|AAF36964.1| 873|Homo sapiens breast carcinoma-associ... 30 9.6
AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding ... 30 9.6
AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associate... 30 9.6
AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homo... 30 9.6
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 30 9.6
AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein. 30 9.6
>BC040946-1|AAH40946.1| 229|Homo sapiens CWC15 homolog (S.
cerevisiae) protein.
Length = 229
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +3
Query: 375 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQ 518
MTTAARPTF+PARGG+G+GE DLS +S+QYSSRDLP HTK+KYR++ Q
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQ 48
Score = 59.3 bits (137), Expect = 2e-08
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Frame = +1
Query: 529 EELRSRDFRKELDDREKDV-------KTTTTKRTSEPQAKRTKVDQVPAASLDADDPL-- 681
EE+R+RDFR+EL++RE+ + T TS +K+ ++DQ+PAA+LDADDPL
Sbjct: 52 EEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTD 111
Query: 682 -EGXXXXXXXXXXXXAALLAELXRI 753
E AALLAEL +I
Sbjct: 112 EEDEDFEEESDDDDTAALLAELEKI 136
>BC032629-1|AAH32629.1| 138|Homo sapiens CWC15 protein protein.
Length = 138
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +3
Query: 375 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQ 518
MTTAARPTF+PARGG+G+GE DLS +S+QYSSRDLP HTK+KYR++ Q
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQ 48
Score = 57.6 bits (133), Expect = 6e-08
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Frame = +1
Query: 529 EELRSRDFRKELDDREKDV-------KTTTTKRTSEPQAKRTKVDQVPAASLDADDPL-- 681
EE+R+RDFR+EL++RE+ + T TS +K+ ++DQ+PAA+LDADDPL
Sbjct: 52 EEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTD 111
Query: 682 -EGXXXXXXXXXXXXAALLAELXR 750
E AALLAEL +
Sbjct: 112 EEDEDFEEESDDDDTAALLAELEK 135
>BC006975-1|AAH06975.1| 139|Homo sapiens Unknown (protein for
IMAGE:4051771) protein.
Length = 139
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +3
Query: 375 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQ 518
MTTAARPTF+PARGG+G+GE DLS +S+QYSSRDLP HTK+KYR++ Q
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQ 48
Score = 57.6 bits (133), Expect = 6e-08
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Frame = +1
Query: 529 EELRSRDFRKELDDREKDV-------KTTTTKRTSEPQAKRTKVDQVPAASLDADDPL-- 681
EE+R+RDFR+EL++RE+ + T TS +K+ ++DQ+PAA+LDADDPL
Sbjct: 52 EEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTD 111
Query: 682 -EGXXXXXXXXXXXXAALLAELXR 750
E AALLAEL +
Sbjct: 112 EEDEDFEEESDDDDTAALLAELKK 135
>AJ250393-1|CAB96541.1| 229|Homo sapiens hypothetical protein
protein.
Length = 229
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +3
Query: 375 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQ 518
MTTAARPTF+PARGG+G+GE DLS +S+QYSSRDLP HTK+KYR++ Q
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQ 48
Score = 59.3 bits (137), Expect = 2e-08
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Frame = +1
Query: 529 EELRSRDFRKELDDREKDV-------KTTTTKRTSEPQAKRTKVDQVPAASLDADDPL-- 681
EE+R+RDFR+EL++RE+ + T TS +K+ ++DQ+PAA+LDADDPL
Sbjct: 52 EEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTD 111
Query: 682 -EGXXXXXXXXXXXXAALLAELXRI 753
E AALLAEL +I
Sbjct: 112 EEDEDFEEESDDDDTAALLAELEKI 136
>AF110775-1|AAF14858.1| 229|Homo sapiens adrenal gland protein
AD-002 protein.
Length = 229
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +3
Query: 375 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQ 518
MTTAARPTF+PARGG+G+GE DLS +S+QYSSRDLP HTK+KYR++ Q
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQ 48
Score = 59.3 bits (137), Expect = 2e-08
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Frame = +1
Query: 529 EELRSRDFRKELDDREKDV-------KTTTTKRTSEPQAKRTKVDQVPAASLDADDPL-- 681
EE+R+RDFR+EL++RE+ + T TS +K+ ++DQ+PAA+LDADDPL
Sbjct: 52 EEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTD 111
Query: 682 -EGXXXXXXXXXXXXAALLAELXRI 753
E AALLAEL +I
Sbjct: 112 EEDEDFEEESDDDDTAALLAELEKI 136
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 799 EVTKKRKDVKKDTTDKSSKPQIKRGK 824
>AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 713 EVTKKRKDVKKDTTDKSSKPQIKRGK 738
>AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 713 EVTKKRKDVKKDTTDKSSKPQIKRGK 738
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 797 EVTKKRKDVKKDTTDKSSKPQIKRGK 822
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 604 EVTKKRKDVKKDTTDKSSKPQIKRGK 629
>AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 713 EVTKKRKDVKKDTTDKSSKPQIKRGK 738
>AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 713 EVTKKRKDVKKDTTDKSSKPQIKRGK 738
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 797 EVTKKRKDVKKDTTDKSSKPQIKRGK 822
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 604 EVTKKRKDVKKDTTDKSSKPQIKRGK 629
>AF227899-1|AAF36964.1| 873|Homo sapiens breast
carcinoma-associated antigen isoform I protein.
Length = 873
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 360 EVTKKRKDVKKDTTDKSSKPQIKRGK 385
>AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding
protein 1-like 1 protein.
Length = 1226
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 713 EVTKKRKDVKKDTTDKSSKPQIKRGK 738
>AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associated
antigen BRCAA1 protein.
Length = 1213
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 718 EVTKKRKDVKKDTTDKSSKPQIKRGK 743
>AF083249-1|AAD41239.1| 748|Homo sapiens Rb binding protein homolog
protein.
Length = 748
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 253 EVTKKRKDVKKDTTDKSSKPQIKRGK 278
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 812 EVTKKRKDVKKDTTDKSSKPQIKRGK 837
>AB030181-1|BAA89794.1| 803|Homo sapiens RBP1-like protein protein.
Length = 803
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 559 ELDDREKDVKTTTTKRTSEPQAKRTK 636
E+ + KDVK TT ++S+PQ KR K
Sbjct: 480 EVTKKRKDVKKDTTDKSSKPQIKRGK 505
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,176,480
Number of Sequences: 237096
Number of extensions: 1450919
Number of successful extensions: 3366
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3361
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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