Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_J10
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93388-3|CAB07655.1|  230|Caenorhabditis elegans Hypothetical pr...    79   3e-15
Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical pr...    33   0.20 
Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL032623-14|CAA21518.1|  593|Caenorhabditis elegans Hypothetical...    29   3.3  
Z70783-8|CAA94859.1|  175|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF016674-6|AAB66129.1|  530|Caenorhabditis elegans Hypothetical ...    29   5.8  

>Z93388-3|CAB07655.1|  230|Caenorhabditis elegans Hypothetical
           protein T10C6.5 protein.
          Length = 230

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +3

Query: 375 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQ 518
           MTTA RPTF PARGG  RGE DLS +S QYSS+D+P HTK+KYR++GQ
Sbjct: 1   MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYRQTGQ 48



 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
 Frame = +1

Query: 523 TSEELRSRDFRKELDDREKDV----KTTTTKRTSEPQAKRTKVDQV---PAASLDADDPL 681
           T  +LR +D R+EL+D+E++     +   +  +S   +KR ++DQ+    AAS+DAD+ +
Sbjct: 50  TEADLRKKDLRRELEDKERNAIREKRARDSASSSSSHSKRQRMDQIAAESAASVDADEAV 109

Query: 682 E--GXXXXXXXXXXXXAALLAELXRI 753
           +               AAL+AEL +I
Sbjct: 110 DELNSSDDDDSDEDDTAALMAELEKI 135


>Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical
           protein C25F9.4 protein.
          Length = 592

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 526 SEELRSRDFRKELDDREKDVKTTTTKRTSEP 618
           S E +SR+ +  LDDR+KD K+   +R +EP
Sbjct: 213 SAEPKSRNLKTPLDDRQKDFKSNLAQRENEP 243


>Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical
           protein M04C3.2 protein.
          Length = 606

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 526 SEELRSRDFRKELDDREKDVKTTTTKRTSEP 618
           S E +SR+ +  LD R+KD K+   +R  EP
Sbjct: 214 SAEPKSRNLKTPLDGRQKDFKSNLAQREKEP 244


>Z81546-1|CAB04449.2|  859|Caenorhabditis elegans Hypothetical
           protein F53A2.1 protein.
          Length = 859

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 511 QVKGTSEELRSRDFRKELDDREKDVKTTTTKRTSEPQAKRTK 636
           Q  GTS++L S  F+KE+D       TTTT +TS     R +
Sbjct: 293 QFTGTSQKLLS--FQKEIDSLNNVTSTTTTLQTSTYTTSRPR 332


>AL032623-14|CAA21518.1|  593|Caenorhabditis elegans Hypothetical
           protein Y43F8B.14 protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 526 SEELRSRDFRKELDDREKDVKTTTTKRTSEP 618
           S+E +SR  +  L D +KD K +  +R  EP
Sbjct: 210 SDETKSRKLKTSLKDHQKDFKKSLAQREKEP 240


>Z70783-8|CAA94859.1|  175|Caenorhabditis elegans Hypothetical
           protein ZK856.11 protein.
          Length = 175

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
 Frame = +1

Query: 478 FLVIRNLNTGNQVKGTSEELRSRD---FRKELDD-----REKDVKTTTTKRTSEPQAKRT 633
           F+V+R +  G++VKG  E +  +D   + +EL        E  +K T   +  +   K  
Sbjct: 68  FVVVRPITEGDKVKGEIEYILDQDNVLYIRELGKWPTCFEENALKMTREAKRGQTSDKMI 127

Query: 634 KVDQVPAASLDADDPLEG 687
             D +P +  + +D  EG
Sbjct: 128 DDDMLPPSESEEEDESEG 145


>AF016674-6|AAB66129.1|  530|Caenorhabditis elegans Hypothetical
           protein C03H5.6 protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = +2

Query: 533 NYALVIFVRSWMIEKKMLKLRLQNVQVNHKQKELRLIKFLQQVLMLMILLKAIPLTLMIQ 712
           N+  + F ++W +E    +L L NVQ  H  + L  I    + +    +   +PL    Q
Sbjct: 5   NFLPIAFCKAWCVECPDRELILANVQYEHVLEMLECIHPTYKAVDDQSVHILLPLAYDYQ 64

Query: 713 MMILLH 730
           M  LLH
Sbjct: 65  MEGLLH 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,635,390
Number of Sequences: 27780
Number of extensions: 246852
Number of successful extensions: 808
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)