Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_J09
         (996 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0112 - 14757947-14758972                                         29   7.6  
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160...    29   7.6  

>09_04_0112 - 14757947-14758972
          Length = 341

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 825 PXGXPPPXGXPPLXPXTPSPXYR 893
           P G PPP   P L P  P P +R
Sbjct: 93  PEGSPPPPPPPALLPAPPMPPHR 115


>02_04_0567 -
           23914330-23914461,23915016-23915136,23915954-23916048,
           23916131-23916301,23917291-23917380,23917636-23918139
          Length = 370

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 825 PXGXPPPXGXPPLXPXTPSPXYREKXL 905
           P   PPP   PPL   +PSP +R   L
Sbjct: 45  PPPPPPPPPPPPLEVVSPSPRWRRPGL 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,045,494
Number of Sequences: 37544
Number of extensions: 332249
Number of successful extensions: 1641
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)