Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_J07
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0087 - 10520708-10520823,10521041-10521130,10521571-105219...    39   0.006

>10_06_0087 -
           10520708-10520823,10521041-10521130,10521571-10521901,
           10522248-10522409,10522506-10522726,10523852-10524056
          Length = 374

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +3

Query: 210 NIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWK-RQTVKEATLNVLVGAEVIFW 386
           N+F+    + L  P+ S+ PQ  +   N I  +KTG WK   TV+  T  V+VG +V   
Sbjct: 53  NVFVGM-NISLIDPRNSDDPQSPKNGENAIIKSKTGYWKVVGTVRIPTSTVIVGMKVSLD 111

Query: 387 FYIGECIGKRHLVWI 431
            Y GE    +   W+
Sbjct: 112 HYEGEAPSGKRTGWV 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,361,493
Number of Sequences: 37544
Number of extensions: 277594
Number of successful extensions: 393
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)