BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_J07
(915 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ007318-1|AAY24700.1| 153|Anopheles gambiae lysozyme c-4 protein. 25 2.4
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 24 7.4
>DQ007318-1|AAY24700.1| 153|Anopheles gambiae lysozyme c-4 protein.
Length = 153
Score = 25.4 bits (53), Expect = 2.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 137 KMASAVAKVPTLINSCHHSGEAKIKYFYEICS 232
+ ASA++ V ++ + +H+GE K+ YE CS
Sbjct: 10 RSASAISFVVLILFTLYHTGEGKV---YEKCS 38
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.8 bits (49), Expect = 7.4
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 158 KVPTLINSCHHSGEAKIKYFYEICSR*TCSTQAKR-AASD 274
K P + E+ K+F I S+ T ST K+ ASD
Sbjct: 911 KAPAAVVGLQFLHESLFKHFINITSKCTASTTCKKNCASD 950
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,002
Number of Sequences: 2352
Number of extensions: 8899
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -