Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_J02
(1010 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 60 5e-10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 50 7e-07
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 41 2e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 3e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.002
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.005
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.20
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.60
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.79
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.0
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.4
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 27 5.5
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.7
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 26 9.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 9.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 60.1 bits (139), Expect = 5e-10
Identities = 54/227 (23%), Positives = 59/227 (25%), Gaps = 8/227 (3%)
Frame = +1
Query: 223 PXPGPPPPRXXXXTPPXXXXKKXXXTXXPPXTXXXARXXXX---AGAPP-PXXGGXPPXX 390
P PP P TPP + PP + +GAPP P G PP
Sbjct: 1037 PSTAPPVP-IPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Query: 391 XPXXXGXPXXPPXXXXXPXXGPGXXXXXXXGAXXXPPPXXXXXXXPXPXPXPXXP--PXP 564
P P P P P + PP P P P P P P
Sbjct: 1096 KPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Query: 565 GGXXGXXPPXXXPPPPXXPXXXXXPXXXXPPPXXXAPXXXGXXPXXGXXPXXXGXPXXXX 744
G P PP P P P P P G P
Sbjct: 1156 SGAPPVPKPSVAAPPVPAPSSGIPP---VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 745 XGXXXPPPXXXGGXPPXAXP--XXPXGPPPRXPXPXXAPPXXXPPPP 879
P P G PP P P P P P + P P P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 48.0 bits (109), Expect = 2e-06
Identities = 46/196 (23%), Positives = 46/196 (23%), Gaps = 5/196 (2%)
Frame = +3
Query: 336 PXXGXGPPXXXGGXPPPXXXXXXGGPXXXPXXXXXPXXGXGXXXXXXXGXXXXPPPXXXX 515
P PP PP G P P P PP
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPP-----PVPAPSSEIPSIPAPSGAPPVPAPS 1089
Query: 516 XXXPPPXAXPXXXPXPXXXXGXXP-PXXXPXPPXXAXXXXXXPXXXPPXXPXXPPXXXXX 692
P P P P P P PP P P P P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 693 PPXGXPPXRXRXPPXXXXRXXXPPPPXXGGGXXXRPXXXPXGXPPPXXXXRXRPPXXXP- 869
PP P PP PP P G P P PP PP P
Sbjct: 1150 PPVPAPSGA---PPVPKPSVAAPPVPAPSSGIP--PVPKPAAGVPPVPPPSEAPPVPKPS 1204
Query: 870 ---PPPPPPXXXXPPP 908
PP PPP P P
Sbjct: 1205 VGVPPVPPPSTAPPVP 1220
Score = 43.6 bits (98), Expect = 5e-05
Identities = 35/139 (25%), Positives = 36/139 (25%), Gaps = 3/139 (2%)
Frame = +3
Query: 498 PPXXXXXXXPPPXAXPXXXPXPXXXXGXXPPXXXPX--PPXXAXXXXXXPXXXPPXXPXX 671
PP PP P P PP P PP P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 672 PPXXXXXPPXGXPPXRXRXPPXXXXRXXXPP-PPXXGGGXXXRPXXXPXGXPPPXXXXRX 848
P PP P PP PP PP +P PPP
Sbjct: 1162 PKPSVAAPPV--PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 849 RPPXXXPPPPPPPXXXXPP 905
P PP P P PP
Sbjct: 1220 PTPSAGLPPVPVPTAKAPP 1238
Score = 36.3 bits (80), Expect = 0.007
Identities = 38/167 (22%), Positives = 39/167 (23%), Gaps = 4/167 (2%)
Frame = +2
Query: 350 GP-PXXXXGGPPPXPXXXXGGXPGXPPXXXXXP--PXXRGXXXXXXXXXXXPPP-PXXXX 517
GP P PPP P P P P P + PP P
Sbjct: 960 GPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSS 1019
Query: 518 XXXPXPXXXPXXPXPXXXXXXXPPPXXXXPPPXXXGXXXXPXXGXPXPPXXPPXXXGXXP 697
P P P P P PP P P P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 698 XGAPXPXXPXPPXXXXAAXXAPPPXXXGGXXPXPXPXSPGXPPPGXP 838
GAP P A PP P P G PP P
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 760 PPPXXXGGXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPP 885
P P PP P P P P APP P PP
Sbjct: 1013 PVPKLSSKAPPV---PLPSADAPPIPVPSTAPPVPIPTSTPP 1051
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 49.6 bits (113), Expect = 7e-07
Identities = 55/239 (23%), Positives = 59/239 (24%), Gaps = 8/239 (3%)
Frame = +1
Query: 223 PXPGPPPPRXXXXTPPXXXXKKXXXTXXPPXTXXXARXXXXAGAPPPXXGGXPPXXXPXX 402
P P PPP +PP + P ++ PPP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL----PPPSSRVSAAALAANK 308
Query: 403 XGXPXXPPXXXXXPXXGPGXXXXXXXGAXXXPPPXXXXXXXPXPXPXPXXPPXPGGXXGX 582
P PP P PPP P P P
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 583 XPPXXXPPPPXXPXXXXXPXXXXPP--PXXXAPXXXGXXPXXGXXPXXXGXPXXXXXGXX 756
P PPP PP P AP P G P
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL----PPLGNASRTSTPPVPTPPSL- 423
Query: 757 XPPPXXXGGXPPXAXPXXPXGPPPRXPXPXXAP-----PXXXPPPPP-PPXXXXPRPGP 915
PP PP A P P G P P P AP P P PP PP P P P
Sbjct: 424 --PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 37.1 bits (82), Expect = 0.004
Identities = 37/153 (24%), Positives = 38/153 (24%), Gaps = 7/153 (4%)
Frame = +2
Query: 377 PPPXPXXXXGGXPGXPPXXXXXPPXXRGXXXXXXXXXXXPPPPXXXXXXXPXPXXXPXXP 556
PPP P G PP PP PPP P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPP---PPRSAPSTGRQPPPLSSSRAVSNPPAPPPA- 394
Query: 557 XPXXXXXXXPP---PXXXXPPPXXXGXXXXPXXGXPXPPXXPPXXXGXXPXGAPXPXX-- 721
P PP PP P PP PP P P P
Sbjct: 395 IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Query: 722 --PXPPXXXXAAXXAPPPXXXGGXXPXPXPXSP 814
P P AA PP P P P +P
Sbjct: 455 IAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 31.9 bits (69), Expect = 0.15
Identities = 31/136 (22%), Positives = 31/136 (22%), Gaps = 3/136 (2%)
Frame = +1
Query: 214 KXXPXPGPPPPRXXXXTPPXXXXKKXXXTXXPPXTXXXARXXXXAGAP-PPXXGGXPPXX 390
K P P PPP R PP PP R P PP PP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP---PPPRSNAAGSIPLPPQGRSAPPPP 364
Query: 391 XPXXXGXP--XXPPXXXXXPXXGPGXXXXXXXGAXXXPPPXXXXXXXPXPXPXPXXPPXP 564
P PP P G P P P P P
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Query: 565 GGXXGXXPPXXXPPPP 612
PP P P
Sbjct: 425 PSAPPSLPPSAPPSLP 440
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +1
Query: 763 PPXXXGGXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPPP 888
PP PP P PP P P P PP P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 796 AXPXXPXGPPPRXPXPXXAPPXXXPPPPPPP 888
A P P P R P + PPP PPP
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/88 (31%), Positives = 28/88 (31%)
Frame = -1
Query: 620 GXXGGGGXXXGGXXPXXPPGXGGXXGXGXGXGXXXXXXXGGGXXXAPXXXXXXXPGPXXG 441
G GGG GG PPG GG G G G G G G PG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFG-GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 440 XXXXXGGXXGXPXXXGXXXGGXPPXXGG 357
GG G GG P GG
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/44 (47%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 887 GGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXG-GXPPXXXGGG 759
GG GG G GG G G GGGP G G G G P GGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 37.5 bits (83), Expect = 0.003
Identities = 32/89 (35%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Frame = -3
Query: 837 GXPGGGXPGXXGXGXGXXP-PXXXGG-GAXXAAXXXXGGXGXXGXGAPXGXX--PXXXGG 670
G GGG G G G P P GG G GG G G G P G P GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG-GGPGGFEGGPGGFGG 242
Query: 669 XXGGXGXPXXGXXXXPXXXGGGXXXXGGG 583
GG G G GGG GGG
Sbjct: 243 GPGGFGGGLGGF-------GGGPGGFGGG 264
Score = 35.1 bits (77), Expect = 0.016
Identities = 20/46 (43%), Positives = 20/46 (43%)
Frame = -1
Query: 914 GPGRGXXXXGGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGGXPP 777
GPG GG GG G GG G G GGGP G G G P
Sbjct: 229 GPG---GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 33.9 bits (74), Expect = 0.037
Identities = 24/57 (42%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = -1
Query: 914 GPGRGXXXXGGGGGGG-XXXGGA---XXGXGXRGGGPXGXXGXAXG-GXPPXXXGGG 759
G G G G GG GG GG G G GGGP G G G G P GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 31.9 bits (69), Expect = 0.15
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = -1
Query: 908 GRGXXXXGGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGGXPPXXXGGGXXXPXXXXXG 729
G G GGG GG G G G GG G G P GG P G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG---PGGFGGG 243
Query: 728 XPXXXGXXPXXGXXPXXXGAXXXGGG 651
G G P G G G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 30.3 bits (65), Expect = 0.45
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = -3
Query: 732 GGXGXXGXGAPXGXXPXXXGGXXGGXGXPXXGXXXX---PXXXGGGXXXXGGGXXXXXXX 562
GG G G P G G GG G G P GG GGG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG---PGGF 247
Query: 561 GXGXXGXXXGXGXXXXXXXGGGG 493
G G G G G G GG
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.5 bits (58), Expect = 3.2
Identities = 27/96 (28%), Positives = 27/96 (28%)
Frame = -1
Query: 887 GGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGGXPPXXXGGGXXXPXXXXXGXPXXXGX 708
G GGG GG G G GP G G G GG G G
Sbjct: 184 GHNGGGFGGFGG---GSGGPPPGPGGFGGFGGFGGEGHHHGG----HGGFGGGPGGFEGG 236
Query: 707 XPXXGXXPXXXGAXXXGGGXXXXGXXXXXGXXGGGG 600
G P G G G G G GG G
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 914 GPGRGXXXXGGGGGGGXXXGGAXXGXGXRG 825
GPG GG GGG GG G G G
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +1
Query: 496 PPPXXXXXXXPXPXPXPXXPPXPGGXXGXXPPXXXPPPPXXPXXXXXPXXXXPPPXXXA 672
PPP P P P P P P G PP PPPP P PPP A
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 659 PPXXPPXXXGXXPXGAPXPXXPXPPXXXXAAXXAPPPXXXGGXXPXPXPXSPGXPPPG 832
PP PP P AP P P P PPP G P P P P G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Frame = +1
Query: 760 PPPXXXGGXP-PXAXPXXPX-----GPPPRXPXPXXAPPXXXPPPPPPP 888
PPP P P P P GPPP P P A PPPPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.5 bits (78), Expect = 0.012
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 787 PPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPPP 888
PP P P P P AP PPPPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 34.7 bits (76), Expect = 0.021
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 762 PPPXXGGGXXXRPXXXPXGXPPPXXXXRXRPPXXXPPPPPPPXXXXPPP 908
PPP P P PPP PP PPPPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPP 777
Score = 34.3 bits (75), Expect = 0.028
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 495 PPPXXXXXXXPPPXAXPXXXPXPXXXXGXXPPXXXPXPPXXAXXXXXXPXXXPP 656
PPP P P P P P G PP P PP A P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.20
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +2
Query: 545 PXXPXPXXXXXXXPPPXXXXPPPXXXGXXXXPXXGXPXPPXXPPXXXGXXPXGAPXPXXP 724
P P P P PPP P G P PP PP G P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA-------PIMGGPPPPPPPPGVAG----AGPPPPPP 780
Query: 725 XPP 733
PP
Sbjct: 781 PPP 783
Score = 31.1 bits (67), Expect = 0.26
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 787 PPXAXPXXPXGPPPRXPXPXXAP-PXXXPPPPPPPXXXXPRPGP 915
PP P P P P P P PPPPPP GP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 31.1 bits (67), Expect = 0.26
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Frame = +2
Query: 584 PPPXXXXPPPXXXG---XXXXPXXGXPXPPXXPPXXXGXXPXGAPXPXXPXPPXXXXAAX 754
PPP P P P G P PP PP G P P P P +
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP--PPPPPPPPAVSAGGSRY 792
Query: 755 XAPPP 769
AP P
Sbjct: 793 YAPAP 797
Score = 30.3 bits (65), Expect = 0.45
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Frame = +2
Query: 707 PXPXXPXPPXXXXAAXXAPPPXXX-GGXXPXPXP---XSPGXPPPGXPXP 844
P P P A PPP GG P P P G PPP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.60
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 353 PPXXXXGGPPPXPXXXXGGXPGXPPXXXXXPPXXRGXXXXXXXXXXXPPPP 505
PP GGPPP P G PP P G P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 722 PXPPXXXXAAXXAPPPXXXGGXXPXPXPXSPGXPPPGXP 838
P PP AP P P P P G PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPV----PPPAPIMGGPPPPPPP 767
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 663 PXXPPXXXXXPPXGXPPXRXRXPPXXXXRXXXPPPPXXGGGXXXRPXXXPXGXPPP 830
P PP P P PP PPPP G P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV-PPPAPIMGGPPPPPPPPGVAGAGPPPPPP---PPP 783
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +1
Query: 481 GAXXXPPPXXXXXXXPXPXPXPXXPPXPGGXXGXXPPXXXPPPP 612
G PPP P P P P GG P P P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 39.1 bits (87), Expect = 0.001
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 811 PXGPPPRXPXPXXAPPXXXPPPPPP 885
P PPP P P PP PPPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +1
Query: 823 PPRXPXPXXAPPXXXPP--PPPPP 888
PP P P PP PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.7 bits (66), Expect = 0.34
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 853 PPXXXPPPPPPPXXXXPRPGP 915
PP PPPPPPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP 25
Score = 29.9 bits (64), Expect = 0.60
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 852 PPXXXPPPPPPPXXXXP--PP 908
PP PPPPPPP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP 25
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 798 PXXXPXGXPPPXXXXRXRPPXXXPPPPPP 884
P P PPP PP PPPPPP
Sbjct: 5 PPGNPPPPPPPPG---FEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 544 PXXPPXPGGXXGXXPPXXXPPPP 612
P PP P G PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 589 PXXXPPPPXXPXXXXXPXXXXPPP 660
P PPPP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 586 PPXXXPPPPXXPXXXXXPXXXXPPP 660
PP PPPP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 791 PXPXPXSPGXPPPGXPXP 844
P P P PG PP P P
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +1
Query: 760 PPPXXXGGXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPP--PPPPXXXXPRP 909
PP PP P PP P P APP PP PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 34.3 bits (75), Expect = 0.028
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 760 PPPXXXGGXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPPP 879
PPP PP + P P GPP P P A P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 33.9 bits (74), Expect = 0.037
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 802 PXXPXGPPPRXPXPXXAPPXXXPPPPPPPXXXXPRP 909
P P PP P P P PPPPP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 33.9 bits (74), Expect = 0.037
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 526 PXPXPXPXXPPXPGGXXGXXPPXXXPPPPXXPXXXXXPXXXXPPP 660
P P PP PP PPPP P P PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.45
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 763 PPXXXGGXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPPPXXXXPRPG 912
PP PP P PP P P P PP P P PG
Sbjct: 1699 PPQMSAPTPPPPPMSVPP-PPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 29.5 bits (63), Expect = 0.79
Identities = 18/64 (28%), Positives = 19/64 (29%), Gaps = 3/64 (4%)
Frame = +2
Query: 587 PPXXXXPPPXXXGXXXXPXXGXPXPPXXP---PXXXGXXPXGAPXPXXPXPPXXXXAAXX 757
P PP P P PP P P P A P P PP +A
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 758 APPP 769
P P
Sbjct: 1743 VPNP 1746
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +2
Query: 695 PXGAPXPXXPXPPXXXXAAXXAPPPXXXGGXXPXPXPXSPGXPPPGXPXP 844
P P P P + PPP P P P PP P P
Sbjct: 1686 PVSTP-PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 4.2
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +2
Query: 662 PXXPPXXXGXXPXGAPXPXXPXPPXXXXAAXXAPPPXXXGGXXPXPXPXSPGXPPPGXPX 841
P P AP P P PP APP G P P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTP--PPPPMSVPPPPSAPP--MPAGPPSAPPPPLPASSAPSVPN 1745
Query: 842 P 844
P
Sbjct: 1746 P 1746
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -1
Query: 908 GRGXXXXGGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXG 789
GRG G GG G GGA G G RGG G G + G
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 34.7 bits (76), Expect = 0.021
Identities = 19/43 (44%), Positives = 19/43 (44%)
Frame = -1
Query: 914 GPGRGXXXXGGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGG 786
G GRG GG GG GG G RGG G G A GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGS-SGGRGGAKGG 70
Score = 32.7 bits (71), Expect = 0.084
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -1
Query: 911 PGRGXXXXGGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGG 786
PG G GG G GG G RGG G G A GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 31.9 bits (69), Expect = 0.15
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 887 GGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGGXPPXXXGGG 759
GG GG GG G G GGG G G GG G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 30.7 bits (66), Expect = 0.34
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 908 GRGXXXXGGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGGXPPXXXGGG 759
GRG G GG G G G RGGG G G G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 29.9 bits (64), Expect = 0.60
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -1
Query: 914 GPGRGXXXXGGGGGGGXXXGGAXXGXGXRGG--GPXGXXGXAXGGXPPXXXGGG 759
G RG GG GG G G RGG G G G A GG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 766 PXXXGGXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPPPXXXXP 903
P PP A P P PP P A P P PPPP P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 35.9 bits (79), Expect = 0.009
Identities = 25/91 (27%), Positives = 25/91 (27%), Gaps = 3/91 (3%)
Frame = +3
Query: 651 PPXXPXXP-PXXXXXPPXGXPPXRXRXPPXXXXRXXXPP--PPXXGGGXXXRPXXXPXGX 821
PP P P P PP PP PP P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 822 PPPXXXXRXRPPXXXPPPPPPPXXXXPPPRT 914
PP P P PPPP P T
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAPVANT 214
Score = 33.9 bits (74), Expect = 0.037
Identities = 19/81 (23%), Positives = 20/81 (24%)
Frame = +2
Query: 527 PXPXXXPXXPXPXXXXXXXPPPXXXXPPPXXXGXXXXPXXGXPXPPXXPPXXXGXXPXGA 706
P P P PP PPP P P P PP P +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 707 PXPXXPXPPXXXXAAXXAPPP 769
P P PPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +1
Query: 760 PPPXXXGGXPPXAXPXXPXGPPP----RXPXPXXAPPXXXPPPPP 882
PP PP + P P PPP P P APP PPP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 31.1 bits (67), Expect = 0.26
Identities = 20/83 (24%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Frame = +3
Query: 495 PPPXXXXXXXPPPXAXPXXXPXPXXXXGXXPPXXXPXPPXXA----XXXXXXPXXXPPXX 662
P P PP + P P PP PP + P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 663 PXXPPXXXXXPPXGXPPXRXRXP 731
P P PP PP + P
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQAP 210
Score = 30.7 bits (66), Expect = 0.34
Identities = 26/107 (24%), Positives = 26/107 (24%), Gaps = 2/107 (1%)
Frame = +3
Query: 588 PXXXPXPPXXAXXXXXXPXXXPPXXPXXPPXXXXXPPXGX--PPXRXRXPPXXXXRXXXP 761
P P PP P PP PP PP PP PP
Sbjct: 124 PPSAPAPPTPQSELRP-PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 762 PPPXXGGGXXXRPXXXPXGXPPPXXXXRXRPPXXXPPPPPPPXXXXP 902
PP P P PPP P PP P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Score = 27.9 bits (59), Expect = 2.4
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Frame = +1
Query: 760 PPPXXXGGXP-PXAXPXXP-XGPPPRXP-XPXXAPPXXXPPP---PPPPXXXXPRP 909
PPP P P P P PPP P P +PP P PP P P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = +1
Query: 763 PPXXXGGXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPPPXXXXPRPGP 915
PP P + P PPR P +P P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.20
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = -1
Query: 908 GRGXXXXGGGGGGGXXXGGAXXGXGX--RGGGPXGXXGXAXGGXPPXXXGG 762
GRG G GG G G + G G RGG G G + GG GG
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -1
Query: 914 GP-GRGXXXXGGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGGXPPXXXGGG 759
GP GRG GG GG G G GGG G G G GG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.60
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Frame = +1
Query: 787 PPXAXPXXPXGPPPRXPXPXXAPPXXX------PPPPPPP 888
P + P PPP P A P PPPPPPP
Sbjct: 156 PTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 29.9 bits (64), Expect = 0.60
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 825 PPXXXXRXRPPXXXPPPPPPPXXXXPPPRT 914
PP + P PPPPPPP PP T
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP--TLPPQST 251
Score = 28.7 bits (61), Expect = 1.4
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +2
Query: 587 PPXXXXPPPXXXGXXXXPXXGXPXPPXXPPXXXGXXPXGAPXPXXPXPPXXXXAAXXAPP 766
PP PP P P PP PP A P + PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEP-DDYYSSGRAVSPEIPP 225
Query: 767 PXXXGGXXPXPXPXSPGXPPPGXP 838
P P P P PPP P
Sbjct: 226 TYTPKQADPLPAPPPP--PPPTLP 247
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 802 PXXPXGPPPRXPXPXXAPPXXXPPPPPP 885
P P P+ P APP PP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.79
Identities = 25/98 (25%), Positives = 25/98 (25%), Gaps = 4/98 (4%)
Frame = +1
Query: 601 PPPPXXPXXXXXPXXXXPPPXXXAPXXXGXXPXXGXXPXXXGXPXXXXXGXXXPPPXXXG 780
P PP P P PP AP P P P P
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPS-APQRPAAPVVPEAPSVPQRPAVPVVPEALS 573
Query: 781 GXPPXAXPXXPXGP----PPRXPXPXXAPPXXXPPPPP 882
P P P P PP P AP PP P
Sbjct: 574 VPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
Score = 29.5 bits (63), Expect = 0.79
Identities = 24/104 (23%), Positives = 24/104 (23%)
Frame = +1
Query: 601 PPPPXXPXXXXXPXXXXPPPXXXAPXXXGXXPXXGXXPXXXGXPXXXXXGXXXPPPXXXG 780
P PP P P PP AP P P P P
Sbjct: 590 PQPPVAPVVPEAPSVPQPPVAPVAPEVPS-VPQRPAVPVVPEAPSVPQPPAAPVVPEVPS 648
Query: 781 GXPPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPPPXXXXPRPG 912
A P P P P P P PP P G
Sbjct: 649 VPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAG 692
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.1 bits (62), Expect = 1.0
Identities = 24/90 (26%), Positives = 24/90 (26%), Gaps = 4/90 (4%)
Frame = +2
Query: 587 PPXXXXPP----PXXXGXXXXPXXGXPXPPXXPPXXXGXXPXGAPXPXXPXPPXXXXAAX 754
PP PP P G P PP PP AP P P P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPG 553
Query: 755 XAPPPXXXGGXXPXPXPXSPGXPPPGXPXP 844
PP G S PPG P
Sbjct: 554 ATAPPGAPGSY--NTSESSNLNAPPGVSMP 581
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 887 GGGGGGGXXXGGAXXGXGXRGGGPXGXXGXAXGGXPPXXXGGGXXXP 747
GGG GG G G G RGG G G GG G P
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGF-GGGRGRGRGGARSGNPNRGSVAP 491
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 135 KKKXKKKKXXXXKKKXKKK 191
KKK KKKK KKK K+K
Sbjct: 436 KKKKKKKKNNKKKKKNKRK 454
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 136 KKKXKKKKXXXXKKKXKKK 192
KKK KKKK KKK K+K
Sbjct: 436 KKKKKKKKNNKKKKKNKRK 454
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 787 PPXAXPXXPXGPPPRXPXPXXAPPXXXPPPPPPPXXXXPRP 909
P P P P P P P P P P P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -1
Query: 827 GGGPXGXXGXAXGGXPPXXXGGGXXXP 747
GG P G G GG P GG P
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNGP 638
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.8 bits (54), Expect = 9.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 849 RPPXXXPPPPPPP 887
+P PPPPPPP
Sbjct: 1090 KPSAVPPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.154 0.557
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,255,853
Number of Sequences: 5004
Number of extensions: 47007
Number of successful extensions: 897
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 525259918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -