Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I23
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.31 
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.9  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    29   5.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548...    28   8.8  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 735 RKRHASRREKGGQVSGKRQGRKQESARGSFQGETPG 628
           R R   RR  GG+V+G+   R +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 647 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 528
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +2

Query: 683 RLPDTCPPFSLREAWRFLIA-----HAVGISVRCRSFASK 787
           RL D C P  L+E WRFL+A      A   S RC++  +K
Sbjct: 849 RLAD-CDPRVLKEQWRFLVAFWNTEEAQAASARCKASRAK 887


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 311 NESAN---ARGEAVCVLGALPLPRSLTRCAR 394
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_1508 -
           30653967-30654245,30654342-30654631,30654773-30654841,
           30654854-30654921,30655016-30655492,30655578-30655874,
           30655974-30656824,30656917-30656990,30657270-30657292,
           30657709-30657772,30658098-30658370,30658511-30658587,
           30658686-30658912
          Length = 1022

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 575 QKSTLKSEVAKPDRTIKIPGV-SPWKLPRALSCFRPCRLPDTCPPFSLRE 721
           Q   L+  V  P RT+   G  + +  P  L+C  PC L   CP  +L +
Sbjct: 158 QNINLQDAVNFPSRTLDCRGCCAGFFCPHGLTCMIPCPLGAYCPESTLNK 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,972,505
Number of Sequences: 37544
Number of extensions: 492753
Number of successful extensions: 1417
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)