Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I21
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0225 + 1784211-1784324,1784398-1784668,1784992-1785248,178...    32   0.51 
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...    32   0.51 
03_01_0378 + 2943605-2943690,2943774-2943920,2944607-2944675,294...    30   2.1  
03_01_0379 + 2946605-2946684,2946798-2946944,2947420-2947488,294...    30   2.7  
05_03_0387 + 13396158-13396271,13396390-13396434,13397004-133976...    29   3.6  
10_05_0036 + 8443957-8444112,8446063-8446129,8446685-8446743,844...    29   6.3  

>03_01_0225 +
           1784211-1784324,1784398-1784668,1784992-1785248,
           1785338-1785450,1791599-1791746,1791943-1792080,
           1792448-1792525
          Length = 372

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +3

Query: 135 FAMPLGIIGITSTNLVLILKHQKNGLQQLKNME*L*RSILPILKIWAMVIIRSYLILVRT 314
           F +PL ++G+ +  LVL L  Q+NG + L  ++ L   +  +L   +M    SY + +  
Sbjct: 128 FGIPLPLLGLVAYGLVLTLSLQENGKKFLPGIDDLDIRLTLLLISTSMATASSYFLYILN 187

Query: 315 PRIL 326
            R +
Sbjct: 188 TRFI 191


>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 260 PEDMGYGDYPKLPDIGED 313
           PED G G+ P++PD+GED
Sbjct: 62  PEDAGEGEQPRVPDLGED 79


>03_01_0378 +
           2943605-2943690,2943774-2943920,2944607-2944675,
           2944758-2944923,2945000-2945228,2945335-2945888
          Length = 416

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 137 CNATRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYP 262
           CN T  +W + + P P  K  ++ +AA K++ +T    T  P
Sbjct: 216 CNDTDVYWFFTWSPSPDDKDVDKSSAATKQFVLTKLRSTNVP 257


>03_01_0379 +
           2946605-2946684,2946798-2946944,2947420-2947488,
           2947608-2947773,2947889-2948117,2948206-2948645,
           2949155-2949702,2949739-2949760
          Length = 566

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 119 KTAALFCNATRNHWNYQYQPGPYPKTPEERAAAAKKY 229
           ++  L C+ T  +WNY + P P     EE  A  + Y
Sbjct: 208 RSGVLPCSDTSVYWNYTWYPSPDDGDAEESVAKMRSY 244


>05_03_0387 +
           13396158-13396271,13396390-13396434,13397004-13397632,
           13397727-13397874,13397971-13398147,13398527-13398595,
           13398699-13398788,13399000-13399158,13399663-13399753,
           13399917-13400008,13400009-13400233,13400394-13400585
          Length = 676

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
 Frame = +2

Query: 182 PYPKTPEERAAAAKKYGMTVEEYTPYPE------DMGYGDYPKLPDIGEDSKDPHYPYDN 343
           PYP   + +  + +  G  VE YT YP       ++ YG Y  LP         HY  +N
Sbjct: 165 PYPV--KVQTLSIRLPGGRVESYTKYPNTKLAESELKYGPYEDLPPFSYSPMVVHYENNN 222

Query: 344 P 346
           P
Sbjct: 223 P 223


>10_05_0036 +
           8443957-8444112,8446063-8446129,8446685-8446743,
           8446855-8446930,8447118-8447189,8447326-8447413,
           8447489-8447744,8447934-8448049,8448247-8448470,
           8448685-8448716,8448882-8449018,8449200-8449289,
           8449383-8449557
          Length = 515

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +2

Query: 365 NEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVFLEDYK 517
           N+ L   A+    D CD+     +SLL  W W  G    F L  V   DYK
Sbjct: 447 NDYLTNLADSIREDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYV---DYK 494


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,024,554
Number of Sequences: 37544
Number of extensions: 360038
Number of successful extensions: 928
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)