Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_I21
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase (ubi... 123 1e-27
BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase (ubi... 123 1e-27
AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase (ubi... 123 1e-27
AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone oxidore... 123 1e-27
AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone oxidore... 123 1e-27
CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein. 120 5e-27
AL133352-2|CAH73562.1| 155|Homo sapiens NADH dehydrogenase (ubi... 120 5e-27
AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase (ubi... 118 4e-26
Y18944-1|CAB46274.1| 43|Homo sapiens NADH dehydrogenase (ubiqu... 64 8e-10
AK126865-1|BAC86728.1| 131|Homo sapiens protein ( Homo sapiens ... 34 0.58
AF170084-1|AAF15317.1| 967|Homo sapiens metalloproteinase with ... 31 7.1
AY358155-1|AAQ88522.1| 948|Homo sapiens SAYY8238 protein. 30 9.4
>BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 123 bits (296), Expect = 1e-27
Identities = 63/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Frame = +2
Query: 146 TRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKD 322
T +H PGPYP+TPEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 323 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 502
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 503 L----EDYKIGRPVTAKQIP 550
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 123 bits (296), Expect = 1e-27
Identities = 63/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Frame = +2
Query: 146 TRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKD 322
T +H PGPYP+TPEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 323 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 502
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 503 L----EDYKIGRPVTAKQIP 550
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 123 bits (296), Expect = 1e-27
Identities = 63/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Frame = +2
Query: 146 TRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKD 322
T +H PGPYP+TPEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 323 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 502
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 503 L----EDYKIGRPVTAKQIP 550
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 123 bits (296), Expect = 1e-27
Identities = 63/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Frame = +2
Query: 146 TRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKD 322
T +H PGPYP+TPEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 323 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 502
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 503 L----EDYKIGRPVTAKQIP 550
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 123 bits (296), Expect = 1e-27
Identities = 63/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Frame = +2
Query: 146 TRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKD 322
T +H PGPYP+TPEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 323 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 502
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 503 L----EDYKIGRPVTAKQIP 550
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein.
Length = 186
Score = 120 bits (290), Expect = 5e-27
Identities = 62/140 (44%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Frame = +2
Query: 146 TRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKD 322
T +H PGPYP+ PEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRIPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 323 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 502
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 503 L----EDYKIGRPVTAKQIP 550
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AL133352-2|CAH73562.1| 155|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 155
Score = 120 bits (290), Expect = 5e-27
Identities = 61/130 (46%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Frame = +2
Query: 176 PGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPEL 352
PGPYP+TPEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +DP Y +D P L
Sbjct: 7 PGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGL 66
Query: 353 KRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVFL----EDYKI 520
+ N+ EP+H +++ +R D S W L GF M+F+ + Y +
Sbjct: 67 RLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIFMCWVGDVYPV 121
Query: 521 GRPVTAKQIP 550
+PV KQ P
Sbjct: 122 YQPVGPKQYP 131
>AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 172
Score = 118 bits (283), Expect = 4e-26
Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +2
Query: 146 TRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED-MGYGDYPKLPDIGEDSKD 322
T +H PGPYP+TPEERAAAAKKY M VE+Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 323 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 502
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 503 L 505
+
Sbjct: 143 M 143
>Y18944-1|CAB46274.1| 43|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8 protein.
Length = 43
Score = 63.7 bits (148), Expect = 8e-10
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = +2
Query: 152 NHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPED 268
+H PGPYP+TPEERAAAAKKY M VE+Y PYP+D
Sbjct: 2 SHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDD 40
>AK126865-1|BAC86728.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ44917 fis, clone BRAMY3010603. ).
Length = 131
Score = 34.3 bits (75), Expect = 0.58
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +2
Query: 173 QPGPYPKTPEERAAAAKKYGMTVEEYTPYPEDMGYGDYPKLPDIGEDSKDP--HY---PY 337
+P P P TP+ R + + + + PED G G P+ P++ SKDP H+ P
Sbjct: 51 RPLPAPPTPQRRCSQGEGRRVLELQLPRVPEDPGLGPAPQ-PEVPRASKDPENHHLTGPQ 109
Query: 338 DNPELKR 358
+P++ R
Sbjct: 110 SSPKIPR 116
>AF170084-1|AAF15317.1| 967|Homo sapiens metalloproteinase with
thrombospondin type 1 motifs ADAMTS1 protein.
Length = 967
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -3
Query: 332 DNEDPWSP-HQYQVAS--DNHHSPYLQDREYTPLQ 237
D+ PWSP Y + S DN H L D+ + P+Q
Sbjct: 438 DHSQPWSPCSAYMITSFLDNGHGECLMDKPHNPIQ 472
>AY358155-1|AAQ88522.1| 948|Homo sapiens SAYY8238 protein.
Length = 948
Score = 30.3 bits (65), Expect = 9.4
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +2
Query: 182 PYPKTPEERAAAAKKYGMTVEEYTPYPEDMGYGDYPKLPDIGEDSK----DPHYP--YDN 343
P P+ + K T PY + +G DYP DI +S +P YP DN
Sbjct: 173 PGPRANLNHPGSRKNLEHTSFRINPYADSLGKPDYPG-ADIQPNSPPFFGEPDYPSAEDN 231
Query: 344 PELKRNFNEPLHATAE 391
L + EP ++ AE
Sbjct: 232 QNLPSTWREPDYSDAE 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,174,410
Number of Sequences: 237096
Number of extensions: 1993180
Number of successful extensions: 4446
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4437
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -