Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I18
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p pro...    32   0.93 
AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB...    32   0.93 
AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA...    32   0.93 

>AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p
           protein.
          Length = 756

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = +1

Query: 100 VFHGSISRSELQCLHTSYTKSSRIFHVHLRPEEGQIADVSRSLTIALIILQEEEIHKFQF 279
           V HG+   +++   H      +R+F     P++G+I DV+  + I  + L E  + + QF
Sbjct: 574 VIHGTAEGTQVVARHCEQNVGARVF----TPQKGEIIDVTSEIHIYQVRLTEGLVSQLQF 629

Query: 280 Q 282
           Q
Sbjct: 630 Q 630


>AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB,
           isoform B protein.
          Length = 664

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = +1

Query: 100 VFHGSISRSELQCLHTSYTKSSRIFHVHLRPEEGQIADVSRSLTIALIILQEEEIHKFQF 279
           V HG+   +++   H      +R+F     P++G+I DV+  + I  + L E  + + QF
Sbjct: 482 VIHGTAEGTQVVARHCEQNVGARVF----TPQKGEIIDVTSEIHIYQVRLTEGLVSQLQF 537

Query: 280 Q 282
           Q
Sbjct: 538 Q 538


>AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA,
           isoform A protein.
          Length = 756

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = +1

Query: 100 VFHGSISRSELQCLHTSYTKSSRIFHVHLRPEEGQIADVSRSLTIALIILQEEEIHKFQF 279
           V HG+   +++   H      +R+F     P++G+I DV+  + I  + L E  + + QF
Sbjct: 574 VIHGTAEGTQVVARHCEQNVGARVF----TPQKGEIIDVTSEIHIYQVRLTEGLVSQLQF 629

Query: 280 Q 282
           Q
Sbjct: 630 Q 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,319,590
Number of Sequences: 53049
Number of extensions: 465720
Number of successful extensions: 980
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)