Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I14
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0153 - 22766805-22767023,22767662-22767940,22768294-227684...    28   8.9  

>05_05_0153 -
           22766805-22767023,22767662-22767940,22768294-22768401,
           22768500-22768779,22768871-22769174,22769367-22769975,
           22770186-22770411
          Length = 674

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
 Frame = -2

Query: 292 IKRIGLIVQEKSVSVHYSHTVGILHCD--PLDDLITQY----LDVIGLLSAH**GDILSY 131
           ++RI  I ++   ++ Y H + I+HCD  P + L+  Y    + VI L S+    D LS 
Sbjct: 505 LRRIQAIARQCLEALVYLHHLNIVHCDLKPENILMKSYSRCEIKVIDLGSSCFLTDNLSL 564

Query: 130 FIDFI*YGRTRXLNXLLQPYDEKGDXXXL 44
           ++    Y     +  L  PYD+K D   L
Sbjct: 565 YVQSRSYRAPEVILGL--PYDQKIDIWSL 591


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,968,098
Number of Sequences: 37544
Number of extensions: 292600
Number of successful extensions: 570
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)