Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I11
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p pro...   196   3e-50
AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA...   196   3e-50

>AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p
           protein.
          Length = 298

 Score =  196 bits (478), Expect = 3e-50
 Identities = 113/215 (52%), Positives = 140/215 (65%), Gaps = 6/215 (2%)
 Frame = +3

Query: 201 MVSHVSIKLASERVNHS--VASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 374
           M ++ +I LA +RV+     A   + PR YTPGEV+     FMRGHGT+ ED+ +K+SVA
Sbjct: 1   MSTNAAIDLALDRVDWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVA 60

Query: 375 GVMQKVNKLICIRPLKSRYVGEIGDVVVGRVLEVQQKRWKVDTNSRLDSILQLSSXKSTW 554
           GV+QKVNKLI +RPLKSRYVGEIGDVVV RV EVQQKRW+VDTNSRLDSIL LSS     
Sbjct: 61  GVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPG 120

Query: 555 RRIEKAFRRG*ADDEKTFTGR*FDK----R*STECIF*WFALIAYKKFEIWQAFTGEL** 722
             +    RR  A+DE+    R  D+        + IF   +L  Y +   +   +  +  
Sbjct: 121 GEL----RRRSAEDEQMMR-RYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILV 175

Query: 723 KYSRSLIKRRKNHFHNLPCAVSVIIGNNGYIWISP 827
           K   +L+KRRK HFHNLPC  SVI+GNNGYIWISP
Sbjct: 176 KVFPALVKRRKMHFHNLPCGASVILGNNGYIWISP 210


>AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA
           protein.
          Length = 298

 Score =  196 bits (478), Expect = 3e-50
 Identities = 113/215 (52%), Positives = 140/215 (65%), Gaps = 6/215 (2%)
 Frame = +3

Query: 201 MVSHVSIKLASERVNHS--VASNNDPPRFYTPGEVITGIQDFMRGHGTYAEDDCLKASVA 374
           M ++ +I LA +RV+     A   + PR YTPGEV+     FMRGHGT+ ED+ +K+SVA
Sbjct: 1   MSTNAAIDLALDRVDWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVA 60

Query: 375 GVMQKVNKLICIRPLKSRYVGEIGDVVVGRVLEVQQKRWKVDTNSRLDSILQLSSXKSTW 554
           GV+QKVNKLI +RPLKSRYVGEIGDVVV RV EVQQKRW+VDTNSRLDSIL LSS     
Sbjct: 61  GVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPG 120

Query: 555 RRIEKAFRRG*ADDEKTFTGR*FDK----R*STECIF*WFALIAYKKFEIWQAFTGEL** 722
             +    RR  A+DE+    R  D+        + IF   +L  Y +   +   +  +  
Sbjct: 121 GEL----RRRSAEDEQMMR-RYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILV 175

Query: 723 KYSRSLIKRRKNHFHNLPCAVSVIIGNNGYIWISP 827
           K   +L+KRRK HFHNLPC  SVI+GNNGYIWISP
Sbjct: 176 KVFPALVKRRKMHFHNLPCGASVILGNNGYIWISP 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,265,523
Number of Sequences: 53049
Number of extensions: 738232
Number of successful extensions: 1824
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)