Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I07
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0158 - 15298902-15299111,15300557-15300655,15301375-153014...    38   0.010
03_01_0367 + 2852287-2852603,2853202-2853278,2853388-2853431,285...    38   0.010
09_06_0062 - 20614443-20615037,20615720-20615842,20617967-20618229     29   3.7  
07_01_0220 - 1631395-1631496,1632063-1634036                           29   3.7  
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24...    29   6.4  
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598...    28   8.5  

>10_08_0158 -
           15298902-15299111,15300557-15300655,15301375-15301443,
           15301535-15301681,15301762-15301839,15302221-15302264,
           15302521-15302603,15303394-15303620
          Length = 318

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 649 DKVGKGLRHFSMKVCEKVRTK 711
           DK G+GLR FSMKVCEKV +K
Sbjct: 91  DKGGRGLRQFSMKVCEKVESK 111



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 716 TSYNEVADELVLEFA 760
           T+YNEVADELV EFA
Sbjct: 114 TTYNEVADELVAEFA 128


>03_01_0367 +
           2852287-2852603,2853202-2853278,2853388-2853431,
           2854294-2854440,2854528-2854596,2854770-2854868,
           2855155-2855193
          Length = 263

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 649 DKVGKGLRHFSMKVCEKVRTK 711
           DK G+GLR FSMKVCEKV +K
Sbjct: 119 DKGGRGLRQFSMKVCEKVESK 139


>09_06_0062 - 20614443-20615037,20615720-20615842,20617967-20618229
          Length = 326

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 486 SYLLKVCHCITRSLCRFLFVLNNSKSCKTGWNRYL 382
           S++L   HC  R++ +   +L   KSC+  W  YL
Sbjct: 27  SFILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNYL 61


>07_01_0220 - 1631395-1631496,1632063-1634036
          Length = 691

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 24/104 (23%), Positives = 47/104 (45%)
 Frame = +1

Query: 136 INRNFKL*KVHLSXSKIGYSFGSNPYFCRHFDL*FWSYELRLPQVVKVLETTSKPLIAQI 315
           I+  + L  V +  S IG+S  + P   RH+ L  WS+ +  P     ++    P + ++
Sbjct: 226 ISTTYNLSDVLMEPSFIGFSSATGPINSRHYIL-GWSFGMNKP--APNIDIAKLPKLPRL 282

Query: 316 EAEPKESPVKIVTVSPVPVKCAKIPVPASFARFGIVQYKQKPAQ 447
             +P+      V V  +P+  A   +    A   +V+ +Q+ A+
Sbjct: 283 APKPQSK----VLVILLPIAIAAFILSVGIAMVFLVRRRQRYAE 322


>08_01_0033 +
           244930-245105,245297-245344,245835-246539,246652-246796,
           246893-247240,247882-248721,248786-248832,249470-249596,
           249672-249836,249973-251370,251453-251713,251802-252161
          Length = 1539

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 354 CITCSGQMCKDTCSSQFCKI 413
           CIT  G +CK  C  +FC+I
Sbjct: 750 CITKQGDICKTFCRIRFCRI 769


>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
            30560292-30560346,30560537-30560613,30561228-30561315,
            30561490-30561593,30562050-30562231,30562347-30563109,
            30563195-30563438,30564513-30564658,30565158-30565283,
            30565404-30565517,30565595-30565762,30566283-30566528,
            30566605-30566767,30566970-30567064,30567274-30567357,
            30567769-30568055,30568359-30568572,30568923-30569140,
            30569386-30569623,30570312-30571118,30571202-30571301,
            30571694-30571737,30571824-30571973
          Length = 1942

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 486  SYLLKVCHCITRSLCRFLFVLNNSKSCKTGWNRYL 382
            ++LL   HC  R + +   +L   KSC+  W  YL
Sbjct: 1714 TFLLSNGHCCWRLVPKLAGLLRCGKSCRLRWTNYL 1748


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,114,327
Number of Sequences: 37544
Number of extensions: 398383
Number of successful extensions: 961
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)