Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I07
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68319-1|CAA92699.1|  598|Caenorhabditis elegans Hypothetical pr...    32   0.46 
AY028165-1|AAK19021.1|  598|Caenorhabditis elegans DPL-1 protein.      32   0.46 
Z19154-9|CAA79552.2|  559|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U55363-2|AAA97961.3|  357|Caenorhabditis elegans Serpentine rece...    28   7.5  
AC024201-18|AAF36026.1|  430|Caenorhabditis elegans Hypothetical...    28   7.5  
U39997-2|AAK68388.1|  378|Caenorhabditis elegans Dehydrogenases,...    28   10.0 
AL031629-5|CAA20979.1|   99|Caenorhabditis elegans Hypothetical ...    28   10.0 

>Z68319-1|CAA92699.1|  598|Caenorhabditis elegans Hypothetical
           protein T23G7.1 protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 664 GLRHFSMKVCEKVRTK 711
           GLRHFS KVCEKV+ K
Sbjct: 72  GLRHFSTKVCEKVKEK 87



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 704 EQRFTSYNEVADELVLEF 757
           E+  T+YNEVADELV ++
Sbjct: 86  EKGLTNYNEVADELVADY 103


>AY028165-1|AAK19021.1|  598|Caenorhabditis elegans DPL-1 protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 664 GLRHFSMKVCEKVRTK 711
           GLRHFS KVCEKV+ K
Sbjct: 72  GLRHFSTKVCEKVKEK 87



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 704 EQRFTSYNEVADELVLEF 757
           E+  T+YNEVADELV ++
Sbjct: 86  EKGLTNYNEVADELVADY 103


>Z19154-9|CAA79552.2|  559|Caenorhabditis elegans Hypothetical
           protein C40H1.1 protein.
          Length = 559

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +3

Query: 279 AGNYK*TTDCSNRSRTEREP--S*NCYCITCSGQMCKDTCSSQFCKIWNC 422
           +G +       N  R E +P      YC  C G++CK   +  FC   +C
Sbjct: 425 SGRFVQVNHAENNKRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASC 474


>U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical
           protein T19H12.6 protein.
          Length = 619

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 461 VSQGLCAGFCLY*TIPNLAKLAGTGIFAHLTGTGDTVTIL 342
           V   + A FCL   +PN A L G  +    T  G+  TI+
Sbjct: 246 VEAAIAASFCLMGAMPNKASLGGGLMMTVKTKNGNATTII 285


>U55363-2|AAA97961.3|  357|Caenorhabditis elegans Serpentine
           receptor, class h protein28 protein.
          Length = 357

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -3

Query: 472 SVSLYHKVFVQVFVCIEQFQILQNWLEQVSLHI*PEQVIQ*QF*LGSLSVLLRF 311
           S+SL+  +   +F+ +  FQIL     ++S H+   Q +  +  L  +S+++ F
Sbjct: 216 SISLFLYIIACIFIPVVAFQILNRMKHRLSRHVVQAQKMSIKALLFQISIIVSF 269


>AC024201-18|AAF36026.1|  430|Caenorhabditis elegans Hypothetical
           protein Y71F9B.14 protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 259 LPQVVKVLETTSKPLIAQI-EAEPKESPVKIVTVSPVPVKCAKIPVP 396
           +P  V   ETT   ++ ++ E     +P + +T +P PVK    P P
Sbjct: 324 VPPAVITTETTPAEVVTELLETTTAPAPAEALTAAPAPVKEPATPEP 370


>U39997-2|AAK68388.1|  378|Caenorhabditis elegans Dehydrogenases,
           short chain protein5 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
 Frame = +2

Query: 338 QLKLLLYHLFRSNVQRYLFQPVL-----QDLELFNTNKNLHKDLVIQ 463
           +L++L +HLF   + +YL  P+      +  EL NT+ N  +++ +Q
Sbjct: 310 ELQMLGFHLFPWTILKYLIMPIYYHQRKRVTELHNTSNNPEQEISLQ 356


>AL031629-5|CAA20979.1|   99|Caenorhabditis elegans Hypothetical
           protein Y106G6D.6 protein.
          Length = 99

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 417 SKSCKTGWNRYLCTFDRNR*YSNNFNWALFRFC 319
           SK  K G N  +C F  N+ +  N +  L  FC
Sbjct: 31  SKFQKAGCNTVICQFHANKCFEQNVSGQLLTFC 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,216,273
Number of Sequences: 27780
Number of extensions: 392995
Number of successful extensions: 1207
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)