Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I06
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical p...    30   1.9  
AL021503-4|CAA16418.1|  352|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z82274-12|CAJ76931.1|  304|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z82274-11|CAB54268.2|  315|Caenorhabditis elegans Hypothetical p...    30   2.5  
AF324487-1|AAK49908.1|  315|Caenorhabditis elegans JC8.12-like p...    30   2.5  

>Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical
           protein ZC455.8a protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = +3

Query: 84  IS*FLKYAYIYGCYYVKPLPKYFTRFSMFLSLFCTQNIIFSILYALSGYFTMSLYSSLAK 263
           IS F K   I GC +     +Y+T   + + LF   + +   +  LS    M+L + L+K
Sbjct: 153 ISPFEKTCSILGCTWNDCFLQYWTGNKLIIGLFTCMSSLILFVKLLSLKKAMNLNNDLSK 212

Query: 264 SNFNTLKKIC 293
           +N+  +   C
Sbjct: 213 TNYLCIGDAC 222


>AL021503-4|CAA16418.1|  352|Caenorhabditis elegans Hypothetical
           protein Y68A4A.7 protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 138 LPKYFTRFSMFLSLFCTQNIIFSILYALSGYFTMSLYSSLAKSNFNTL 281
           LP Y   F   LSLF   N +  ++  L G FT + Y  L +S  +TL
Sbjct: 90  LPMYGMFFVGILSLFSVPNTVQFLIVYLMGTFTSASYVYLFESRSSTL 137


>Z82274-12|CAJ76931.1|  304|Caenorhabditis elegans Hypothetical
           protein JC8.12b protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +3

Query: 195 IIFSILYALSGYFTMSLYSSLAKSNFNTLKKI 290
           +I SILY +S + T++ +  +A  NF+++K++
Sbjct: 65  VIPSILYTISQWITVASFEGIAMPNFDSVKRL 96


>Z82274-11|CAB54268.2|  315|Caenorhabditis elegans Hypothetical
           protein JC8.12a protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +3

Query: 195 IIFSILYALSGYFTMSLYSSLAKSNFNTLKKI 290
           +I SILY +S + T++ +  +A  NF+++K++
Sbjct: 76  VIPSILYTISQWITVASFEGIAMPNFDSVKRL 107


>AF324487-1|AAK49908.1|  315|Caenorhabditis elegans JC8.12-like
           protein protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +3

Query: 195 IIFSILYALSGYFTMSLYSSLAKSNFNTLKKI 290
           +I SILY +S + T++ +  +A  NF+++K++
Sbjct: 76  VIPSILYTISQWITVASFEGIAMPNFDSVKRL 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,207,177
Number of Sequences: 27780
Number of extensions: 446071
Number of successful extensions: 1123
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)