Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I06
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       23   4.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   8.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.5  

>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 367 IIFLTLIYSAPQPXTFP 417
           +++++ IY+AP+P   P
Sbjct: 13  VVYISYIYAAPEPEPAP 29


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/36 (22%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 421 IYQDKFQQIKLAIHSILSCGFKNSIIPV-VYYCIFY 525
           +Y++K  +    +H+I++C  +  + P+ +  C  Y
Sbjct: 98  LYRNKTVKYSARMHAIIACQMEFQLYPMDIQICPIY 133


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 378 NAHIFSPTTLXISTYLSRQVSTD*ISHPQYFVMWF 482
           NAH    TTL ++  LS  V+   +  P+ +++ F
Sbjct: 731 NAHETQITTLCVAISLSATVTLVCLYSPKIYIILF 765


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 422  ICGNVQGCGAEYMSVKKIIQAHPHAT 345
            +CG+       Y ++K IIQ H   T
Sbjct: 1071 VCGDCTMAEDVYQTLKHIIQTHGEMT 1096


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 378 NAHIFSPTTLXISTYLSRQVSTD*ISHPQYFVMWF 482
           NAH    TTL ++  LS  V+   +  P+ +++ F
Sbjct: 821 NAHETQITTLCVAISLSATVTLVCLYSPKIYIILF 855


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,361
Number of Sequences: 438
Number of extensions: 5975
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)