Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_I05
         (982 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      56   2e-09
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   8.0  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 55.6 bits (128), Expect = 2e-09
 Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
 Frame = +3

Query: 240 PXGSSNGTCVTQVGGYCFVAVEEVLD-ESGSVVLDRTAGCLSADE-SGLMQCKSSQV-PH 410
           P    NGTC T+ GG CFV+VE VLD E+  +V + + GC+S ++  GL+QCK   V P 
Sbjct: 81  PGNLQNGTCETRPGGSCFVSVEAVLDEETKQLVPEYSHGCMSPEQGGGLLQCKVGTVSPQ 140

Query: 411 QHPQS 425
            H +S
Sbjct: 141 LHGKS 145


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 241 GARSARRRTSHSQARTHLVVXXVLKQQ 161
           GA+  R R   ++AR+HL    V K+Q
Sbjct: 842 GAKPHRSRCEATEARSHLADSQVKKEQ 868


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,360
Number of Sequences: 2352
Number of extensions: 10471
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)