Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_I04
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces pom... 100 5e-22
SPBC16D10.03 |pgp2||metallopeptidase Pgp2|Schizosaccharomyces po... 69 1e-12
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 28 1.5
SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|... 27 4.6
SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyce... 27 4.6
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 4.6
SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.1
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 26 6.1
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 8.1
SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr 1|||M... 26 8.1
>SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 412
Score = 99.5 bits (237), Expect = 5e-22
Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 10/215 (4%)
Frame = +1
Query: 184 IETSCDDTGCXXXXXXXXXXXXS-----LKSQNLV--HLRNGGIIPDVAQDLHRKYIEPT 342
IETSCDDT L + + + GGI P + H+K +
Sbjct: 44 IETSCDDTSVSVVRTSDSSSHCQNEIICLNTHRTISKYEAYGGIHPTIVIHEHQKNLAKV 103
Query: 343 VTETLLKANLL-MKDISAIAVTVKPGLPLSLAVGMKYAKHLARINAKPIIPIHHMEAHAL 519
+ T+ A + D IAVT PG+ LAVG+ AK LA KP++ +HHM+AHAL
Sbjct: 104 IQRTISDAARSGITDFDLIAVTRGPGMIGPLAVGLNTAKGLAVGLQKPLLAVHHMQAHAL 163
Query: 520 TVRMEHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSIDLAPGELFDKIARRMKLRNV 699
V++E +++FPYL +L+SGGH +L ++ ++ + D+A G+ DK A K +
Sbjct: 164 AVQLEKSIDFPYLNILVSGGHTMLVYSNSLLNHEIIVTTSDIAVGDYLDKCA---KYLGI 220
Query: 700 PELSTMCGGQAVETAALRATNPEMFNL--PIPLXT 798
P + M A+E A N ++L PIPL T
Sbjct: 221 PWDNEM-PAAALEQFASPEINSTSYSLKPPIPLNT 254
>SPBC16D10.03 |pgp2||metallopeptidase Pgp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 68.5 bits (160), Expect = 1e-12
Identities = 40/138 (28%), Positives = 68/138 (49%)
Frame = +1
Query: 289 GIIPDVAQDLHRKYIEPTVTETLLKANLLMKDISAIAVTVKPGLPLSLAVGMKYAKHLAR 468
G +P HR +I P + + +A + KDI I T PG+ L A+ L+
Sbjct: 47 GFLPSDTAKHHRAWIIPLIKQAFAEAKISFKDIDCICFTKGPGIGAPLNSVALCARMLSL 106
Query: 469 INAKPIIPIHHMEAHALTVRMEHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSIDLA 648
I+ KP++ ++H H R P +VL +SGG+ + + + K+ + G+++D+A
Sbjct: 107 IHKKPLVAVNHCIGHIEMGREITGAQNP-VVLYVSGGNTQV-IAYSEKKYRIFGETLDIA 164
Query: 649 PGELFDKIARRMKLRNVP 702
G D+ AR + L N P
Sbjct: 165 IGNCLDRFARIIGLSNAP 182
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -3
Query: 749 NAAVSTACPPHIVESSGTFLSFILLAILSNSSPGAKSILLPRRRNLF 609
NA S I E FLSF L I + SS S+ LP NLF
Sbjct: 16 NAGGSQVTESEIEEEDIEFLSFAALKIGATSSLSNSSLGLPEYSNLF 62
>SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 584
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 378 ERHKRNSCYSKTWFTIKS-GCRHEVCQTFSTN*C*TYNSYSPYGSTCIDSQNGTQ 539
E K+ S ++ W I S G +H+VC T + + Y+ ST + + +GT+
Sbjct: 66 ETKKKLSFGARVWDLICSPGRQHDVCVAAPTQLVRSCDDYANSASTLVTNDDGTK 120
>SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 282
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 716 IVESSGTFLSFILLAILSNSSPGAKSILLP 627
+V S G FL F+L AIL+ + S+++P
Sbjct: 197 VVVSHGIFLPFLLRAILARARTPLPSMIIP 226
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 287 AELYLMLLKIFIGNILNPQSQKHY 358
AEL+ +L IF+ + LN SQ HY
Sbjct: 77 AELHRILFPIFVHSYLNLLSQDHY 100
>SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 243
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 262 QNLVHLRNGGIIPDVAQDLH---RKYIEPTVTETLLKANLLMKDISAIAVTVKPGLPLSL 432
+N +HLRNG +PD A + K + ++LK L ++ + V+ + +
Sbjct: 106 KNFLHLRNGRFVPDEADNFQFGDSKIVTKIAFISILKKILKTPNLHLVGHGVENEIKYAN 165
Query: 433 AVGMKYAKHLARINAKPI 486
+G+ K + ++ + +
Sbjct: 166 VLGIPIPKDVTVLDTQNV 183
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 56 FNVILKDQNIDDARNTLQKCYEYIKK 133
F +I K+Q + +QK YE I+K
Sbjct: 722 FEIISKEQEASSQQENIQKAYEIIEK 747
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 250 SLKSQNLVHLRNGGIIPDVAQDLHRKYIEPTVTETLLKANLLMKDISAIAVTVKPGLP 423
+LK L+H IP++ +L+ YIE T +L+ LL + A A+ + LP
Sbjct: 337 NLKVLQLLHEHGLASIPELKHELYMAYIERKTT-SLVCLYLLGVESLAPALRIPTALP 393
>SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 744 RCFHSLSSTHSGEFRYIPKFHSPSNFIK*FTWCQVYTF 631
RC + + SG +RY K H ++F + +W + F
Sbjct: 365 RCANGGTLLTSGWYRYARKIHYTADFFQSLSWALITGF 402
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,535,386
Number of Sequences: 5004
Number of extensions: 73347
Number of successful extensions: 163
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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