Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_H24
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 108 4e-24
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 108 4e-24
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 105 4e-23
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 105 4e-23
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 81 1e-15
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 81 1e-15
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 81 1e-15
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 68 1e-11
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 68 1e-11
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 68 1e-11
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 61 9e-10
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 61 9e-10
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 59 5e-09
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 56 3e-08
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 50 3e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 50 3e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 50 3e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 50 3e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 47 2e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 47 2e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 5e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 45 6e-05
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 44 1e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 1e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 2e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 2e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 2e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 2e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 43 3e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 3e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 43 3e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 3e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 3e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 3e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 42 8e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.002
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 0.002
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 40 0.002
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 0.002
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 40 0.002
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 40 0.002
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 40 0.002
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 40 0.003
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 39 0.004
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 38 0.007
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.009
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.009
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.009
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.009
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 37 0.016
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.016
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 36 0.038
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 33 0.20
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 33 0.20
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.27
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.27
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 33 0.27
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 31 0.82
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 2.5
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 4.4
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 7.6
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 7.6
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 108 bits (260), Expect = 4e-24
Identities = 57/132 (43%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESI 351
TDN++NGNA ++ N G ++D+K+FVGG+S E ++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 352 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 528
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 529 SEISDDEIRNFF 564
S+ S+ ++R+ F
Sbjct: 119 SDYSEQDLRSHF 130
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 435
+++K+FVGGL + + ++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 436 MAAGEHTINNKKVDPKKAKARHGKIFVG 519
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+FG + ++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 132 QFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 730
++G + + ++ +D+T + +GF F+ F + + L ++TI GK V+VK A
Sbjct: 51 QYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 108 bits (260), Expect = 4e-24
Identities = 57/132 (43%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESI 351
TDN++NGNA ++ N G ++D+K+FVGG+S E ++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 352 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 528
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 529 SEISDDEIRNFF 564
S+ S+ ++R+ F
Sbjct: 119 SDYSEQDLRSHF 130
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 435
+++K+FVGGL + + ++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 436 MAAGEHTINNKKVDPKKAKARHGKIFVG 519
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 54.8 bits (126), Expect = 8e-08
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+FG + ++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 132 QFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 730
++G + + ++ +D+T + +GF F+ F + + L ++TI GK V+VK A
Sbjct: 51 QYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 105 bits (252), Expect = 4e-23
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 9/115 (7%)
Frame = +1
Query: 247 GRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 426
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 427 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFF 564
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYF 154
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 442 AGEHTINNKKVDPKKAKAR 498
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 46.0 bits (104), Expect = 4e-05
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 572 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+G + + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 157 YGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 572 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
FG + E + D + +GF FITF V+ +L + + GK++D K A PK
Sbjct: 68 FGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 105 bits (252), Expect = 4e-23
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 9/115 (7%)
Frame = +1
Query: 247 GRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 426
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 427 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFF 564
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYF 154
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 442 AGEHTINNKKVDPKKAKAR 498
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 46.0 bits (104), Expect = 4e-05
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 572 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+G + + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 157 YGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 572 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
FG + E + D + +GF FITF V+ +L + + GK++D K A PK
Sbjct: 68 FGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 81.0 bits (191), Expect = 1e-15
Identities = 45/104 (43%), Positives = 58/104 (55%)
Frame = +1
Query: 196 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNT 375
AENG GD+ S E ++ RK+FVGGL+ TT +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 376 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 507
RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDK 104
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
++L+V G+ + T L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 442 AGEHTINNKKVDPKKAKAR 498
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 45 QFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 136 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 505 KIFVGGLSSEISDDEIRNFF 564
KIFVGGL+S +DD +R F+
Sbjct: 24 KIFVGGLTSNTTDDLMREFY 43
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 81.0 bits (191), Expect = 1e-15
Identities = 45/104 (43%), Positives = 58/104 (55%)
Frame = +1
Query: 196 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNT 375
AENG GD+ S E ++ RK+FVGGL+ TT +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 376 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 507
RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDK 104
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
++L+V G+ + T L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 442 AGEHTINNKKVDPKKAKAR 498
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 45 QFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 136 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 505 KIFVGGLSSEISDDEIRNFF 564
KIFVGGL+S +DD +R F+
Sbjct: 24 KIFVGGLTSNTTDDLMREFY 43
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 81.0 bits (191), Expect = 1e-15
Identities = 45/104 (43%), Positives = 58/104 (55%)
Frame = +1
Query: 196 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNT 375
AENG GD+ S E ++ RK+FVGGL+ TT +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 376 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 507
RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDK 104
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
++L+V G+ + T L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 442 AGEHTINNKKVDPKKAKAR 498
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 45 QFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 136 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 505 KIFVGGLSSEISDDEIRNFF 564
KIFVGGL+S +DD +R F+
Sbjct: 24 KIFVGGLTSNTTDDLMREFY 43
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
RKLF+GGLS +TT ++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 442 AGEHTINNKKVDPKKAKAR 498
H + K VD K+A R
Sbjct: 109 DRPHKLGGKTVDSKRAIPR 127
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++G +++ + D +GF F+TF S + +GGK VD KRA P+
Sbjct: 71 QWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +1
Query: 505 KIFVGGLSSEISDDEIRNFF 564
K+F+GGLS + +D+++ N+F
Sbjct: 50 KLFIGGLSHDTTDEQLGNYF 69
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
RKLF+GGLS +TT ++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 442 AGEHTINNKKVDPKKAKAR 498
H + K VD K+A R
Sbjct: 129 DRPHKLGGKTVDSKRAIPR 147
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++G +++ + D +GF F+TF S + +GGK VD KRA P+
Sbjct: 91 QWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +1
Query: 505 KIFVGGLSSEISDDEIRNFF 564
K+F+GGLS + +D+++ N+F
Sbjct: 70 KLFIGGLSHDTTDEQLGNYF 89
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
RKLF+GGLS +TT ++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 442 AGEHTINNKKVDPKKAKAR 498
H + K VD K+A R
Sbjct: 130 DRPHKLGGKTVDSKRAIPR 148
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++G +++ + D +GF F+TF S + +GGK VD KRA P+
Sbjct: 92 QWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +1
Query: 505 KIFVGGLSSEISDDEIRNFF 564
K+F+GGLS + +D+++ N+F
Sbjct: 71 KLFIGGLSHDTTDEQLGNYF 90
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1
Query: 310 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 489
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 490 KARHGK 507
R K
Sbjct: 61 VPRDDK 66
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
++L+V G+ + T L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 442 AGEHTINNKKVDPKKAKAR 498
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 7 QFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 63
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 98 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1
Query: 310 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 489
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 490 KARHGK 507
R K
Sbjct: 61 VPRDDK 66
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
++L+V G+ + T L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 442 AGEHTINNKKVDPKKAKAR 498
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 7 QFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 63
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 739
++GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 98 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 58.8 bits (136), Expect = 5e-09
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +1
Query: 232 SAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 411
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 412 APESIDKVMAAGEHTINNKKV 474
ES+ + N+K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 58.0 bits (134), Expect = 8e-09
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +1
Query: 238 EAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 417
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 418 ESIDKVMAAGEHTINNKKVD 477
+ +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
Score = 36.3 bits (80), Expect = 0.029
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 572 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 736
+G+I V M +D +GF ITF+S+ N ++ I G VDV+ P
Sbjct: 48 YGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 184 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKT 363
+N N + SQ + E D + ++VG + + T +E+ HF G + + ++
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQC 111
Query: 364 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVDPKK 486
D +G +GFA++ F E + +A + + + KVDPK+
Sbjct: 112 DRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 56.4 bits (130), Expect = 3e-08
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +1
Query: 217 SQDHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRG 390
+Q N+ G D K+FVGGL + T+ K L ++F +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 391 FAFIVFKAPESIDKVMAAGEHTINNKKVD 477
+ F+ K S ++ I+ +K +
Sbjct: 78 YGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 730
+FG I E + D+ + +G+ F+T + K P I G++ +V A
Sbjct: 57 QFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKANVNLA 110
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/77 (37%), Positives = 37/77 (48%)
Frame = +1
Query: 190 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDP 369
G GGG + + + L V LS TT K+LRD FG +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 370 NTGRSRGFAFIVFKAPE 420
+G SRGF FI F E
Sbjct: 112 PSGNSRGFGFIYFNLIE 128
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +1
Query: 229 NSAEAPGRDDD--RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 402
N AE P +D R LFVG +++ET+ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 403 VF 408
+
Sbjct: 150 EY 151
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 423
+++VG +S+E LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 423
+++VG +S+E LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 423
+++VG +S+E LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 259 DRKLFVGGLSWETTXKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 435
D +FVG L +E T L F A G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 436 MAAGEHTINNKKVDPKKAK 492
+A TI +K D + K
Sbjct: 303 LALSMETIKMEKRDLRITK 321
Score = 34.7 bits (76), Expect = 0.088
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Frame = +1
Query: 229 NSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVK---------------- 360
++A A ++ +FVG + K +R F +G I S+ ++
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHL 191
Query: 361 TDPNTGRSRGFAFIV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVG 519
T + F V F A ES++K + +H I KV KK + + IFVG
Sbjct: 192 TGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVG 251
Query: 520 GLSSEISDDEIRNFF 564
L EI++D + FF
Sbjct: 252 NLPFEITEDALITFF 266
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 423
D +++GGLS+ + ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS 91
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 48.0 bits (109), Expect = 9e-06
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
++VG ++TT +EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Frame = +1
Query: 151 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTXKELRDH 321
N AQ + G+ G S +DDD R LFVG + + +E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 322 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 501
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 502 GK------IFVGGLSSEISDDEIRNFF 564
GK +FVGGL S + ++ F
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAF 271
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Frame = +1
Query: 151 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTXKELRDH 321
N AQ + G+ G S +DDD R LFVG + + +E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 322 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 501
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 502 GK------IFVGGLSSEISDDEIRNFF 564
GK +FVGGL S + ++ F
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAF 271
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Frame = +1
Query: 151 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTXKELRDH 321
N AQ + G+ G S +DDD R LFVG + + +E+R
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165
Query: 322 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 501
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 221
Query: 502 GK------IFVGGLSSEISDDEIRNFF 564
GK +FVGGL S + ++ F
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAF 248
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 420
L+V + + LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 36.7 bits (81), Expect = 0.022
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 444
L++G L + + L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 445 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFX*IWNYL 585
I+ + + DP +A +G IF+ L I + + + F N L
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 420
L+V + + LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 36.7 bits (81), Expect = 0.022
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 444
L++G L + + L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 445 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFX*IWNYL 585
I+ + + DP +A +G IF+ L I + + + F N L
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Frame = +1
Query: 223 DHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFA 396
D++ + +P D K+FVG + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 397 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 549
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 550 IRNFF 564
+R F
Sbjct: 158 LREIF 162
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++RKLF+G LS + + LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Frame = +1
Query: 223 DHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFA 396
D++ + +P D K+FVG + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 397 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 549
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 550 IRNFF 564
+R F
Sbjct: 158 LREIF 162
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++RKLF+G LS + + LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Frame = +1
Query: 223 DHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFA 396
D++ + +P D K+FVG + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 397 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 549
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 550 IRNFF 564
+R F
Sbjct: 158 LREIF 162
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++RKLF+G LS + + LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Frame = +1
Query: 223 DHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFA 396
D++ + +P D K+FVG + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 397 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 549
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 550 IRNFF 564
+R F
Sbjct: 158 LREIF 162
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++RKLF+G LS + + LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Frame = +1
Query: 223 DHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFA 396
D++ + +P D K+FVG + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 397 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 549
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 550 IRNFF 564
+R F
Sbjct: 158 LREIF 162
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++RKLF+G LS + + LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Frame = +1
Query: 223 DHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFA 396
D++ + +P D K+FVG + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 397 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 549
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 550 IRNFF 564
+R F
Sbjct: 158 LREIF 162
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRG 390
++RKLF+G LS + + LR+ F +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Frame = +1
Query: 223 DHNSAEAPGRDDDR--KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFA 396
D++ + +P D K+FVG + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 397 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 549
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 550 IRNFF 564
+R F
Sbjct: 158 LREIF 162
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++RKLF+G LS + + LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Frame = +1
Query: 181 QLNGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTXKELRDHFGAYGEIESI 351
++ + ++ D +D S + D + L V G+ ++TT + + +F G +
Sbjct: 143 KVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFC 202
Query: 352 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKI 510
+K + G S+GF F+ + +KV+A +H I+ ++ D K R +I
Sbjct: 203 EIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRI 261
Query: 511 FVGGLSSEISDDEIRNFF 564
FVG L+ ++ + ++R F
Sbjct: 262 FVGRLTDKVDEHQLRKVF 279
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +1
Query: 247 GRDDDRKLFVGGLSWETTXKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAP 417
GR ++FVG L+ + +LR FG A IE+ V TD + RGFAF+ +
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSA 312
Query: 418 ESIDKVMAAGEHTINNKKVDPKKAKAR 498
E+ +++++ G T+N V A+ R
Sbjct: 313 EAAERIVSKGSLTVNGLSVGLSIAQPR 339
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 724
+ GT++ E+ K+ KGF F+ S N +L P+ I G+ DVK
Sbjct: 195 DIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVK 245
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++VG + ++ T +E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 232 SAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 408
SA D +FVG L E K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 409 KAPESIDKVMAA 444
+ E+ D + A
Sbjct: 150 ASFEASDTALEA 161
Score = 41.5 bits (93), Expect = 8e-04
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +1
Query: 250 RDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 429
R+ D ++VGGL + + L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 430 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFF 564
+ + K + KA A IFVG L E+ + + + F
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTF 120
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 575 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKRAT 733
G ++ V MP D+ +GF F+ F E+ + +K + GK + V +A+
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 232 SAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 408
SA D +FVG L E K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 409 KAPESIDKVMAA 444
+ E+ D + A
Sbjct: 160 ASFEASDTALEA 171
Score = 41.5 bits (93), Expect = 8e-04
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +1
Query: 250 RDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 429
R+ D ++VGGL + + L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 430 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFF 564
+ + K + KA A IFVG L E+ + + + F
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTF 130
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 575 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKRAT 733
G ++ V MP D+ +GF F+ F E+ + +K + GK + V +A+
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKAS 100
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 223 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 402
D A + DD+KLF+G LS + + E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 403 VFK 411
+K
Sbjct: 170 KYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 223 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 402
D A + DD+KLF+G LS + + E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 403 VFK 411
+K
Sbjct: 170 KYK 172
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 426
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 241 APGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 420
APG + V L + K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 421 SIDK 432
K
Sbjct: 179 DAQK 182
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 426
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 241 APGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 420
APG + V L + K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 421 SIDK 432
K
Sbjct: 324 DAQK 327
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
++VG ++TT +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/97 (24%), Positives = 51/97 (52%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 444
++FVGG TT ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 445 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 555
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKR 694
+F + +V+M Q KG+ FITFE+E ++ K TPK+
Sbjct: 88 KFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKLTPKQ 129
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 223 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 402
+ + AE + L+V L L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 403 VFKAPE 420
F+ PE
Sbjct: 363 CFEKPE 368
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 444
L+VG L + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 445 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFX*IWNYL 585
++ K + DP ++ G IF+ L I + I + F N L
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 322 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 444
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 223 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 402
+ + AE + L+V L L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 403 VFKAPE 420
F+ PE
Sbjct: 303 CFEKPE 308
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
L+VG L + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 322 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 444
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 223 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 402
+ + AE + L+V L L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 403 VFKAPE 420
F+ PE
Sbjct: 300 CFEKPE 305
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 322 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 444
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 223 DHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 402
+ + AE + L+V L L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 403 VFKAPE 420
F+ PE
Sbjct: 363 CFEKPE 368
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 444
L+VG L + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 445 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFX*IWNYL 585
++ K + DP ++ G IF+ L I + I + F N L
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 322 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 444
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/97 (24%), Positives = 51/97 (52%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 444
++FVGG TT ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 445 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 555
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKR 694
+F + +V+M Q KG+ FITFE+E ++ K TPK+
Sbjct: 89 KFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKLTPKQ 130
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
+FVG LS E ++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 80
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 496 RHGKIFVGGLSSEISDDEIRNFF 564
RH +FVG LSSE+ + ++R F
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAF 42
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
+FVG LS E ++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 90
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 496 RHGKIFVGGLSSEISDDEIRNFF 564
RH +FVG LSSE+ + ++R F
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAF 52
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
+FVG LS E ++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 193
Score = 39.1 bits (87), Expect = 0.004
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Frame = +1
Query: 247 GRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF------ 408
G D+ R L+VG L T + F G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 409 -KAPESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFF 564
+A ++++K + N V+P + ++ RH +FVG LSSE+ + ++R F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF 155
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
+FVG LS E ++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 161
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 496 RHGKIFVGGLSSEISDDEIRNFF 564
RH +FVG LSSE+ + ++R F
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAF 123
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 43.2 bits (97), Expect = 3e-04
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 435
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 436 M 438
+
Sbjct: 113 L 113
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 247 GRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 423
G +D+K++VG L + KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 424 IDKVMAAGEHTINNKKV 474
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 441
R L+VGG + + T K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 572 FGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDLLKTPKRTIGGKEVDVKRATP 736
FG ++ + +P D + +GF F+ F+ +E + + + GK + V A P
Sbjct: 34 FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARP 89
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 247 GRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 423
G +D+K++VG L + KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 424 IDKVMAAGEHTINNKKV 474
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 250 RDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 429
R D+ V L E ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 430 KVMA 441
+ +A
Sbjct: 232 RAIA 235
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFES 655
+ G ++ + + DK KGF F+TFES
Sbjct: 198 KIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 196 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNT 375
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 376 GRSRGFAFIVF 408
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 196 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNT 375
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 376 GRSRGFAFIVF 408
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 423
+LF+ L + T +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 444
+L V L T ++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 445 GEHTINNKK 471
T N K
Sbjct: 63 SNQTFFNSK 71
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 435
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 436 M 438
+
Sbjct: 119 L 119
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 247 GRD-DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 408
G D R +FVG +S++ + +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +1
Query: 214 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRG 390
D + ++ AP R + + FV + E T ++ D F YG+I++I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 391 FAFIVFKAPESIDKVMAAGEHTI---NNKKVD 477
+A + ++ + ++ + T N KVD
Sbjct: 98 YALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 244 PGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 423
P D +++V + + ++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 424 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 510
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = +1
Query: 208 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSR 387
GG D +++VG + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 388 GFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 552
G+AF+ + E + H I+ K + ++F+G + S DEI
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEI 297
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 244 PGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 423
P D +++V + + ++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 424 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 510
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Frame = +1
Query: 241 APGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVF--- 408
APG +D R +FV L + TT E+R A + SI N+ RGFA++V
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 409 -KAPESI--DKVMAAGEHTINNKKVDPKK-------AKARHGKIFVGGLSSEISDDEIRN 558
KA +++ D+V G + DP+K K+FV + + +DDE++
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISAN-DPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKA 701
Query: 559 FF 564
F
Sbjct: 702 LF 703
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 280 GLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 459
GL WE T +ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 460 NNKKVD 477
++ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 280 GLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 459
GL WE T +ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 460 NNKKVD 477
++ ++
Sbjct: 68 GSRYIE 73
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 226 HNSAEAPG--RDDDRK---LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRG 390
H+++E P R D K +FVG LS + + + L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 391 FAFIVFKAPESIDKVMA 441
+ F+ F ++ + +A
Sbjct: 178 YGFVSFPNKQNAENAIA 194
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 435
D+ ++VG +S +TT +LRD F YG+I + + +++ +AF+ ++ E K
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKA 288
Query: 436 M 438
+
Sbjct: 289 I 289
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 444
L + L T +E+R F + GEIES + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 445 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFF 564
+ NK + P + + ++V G+ ++ E+ + F
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIF 148
Score = 34.7 bits (76), Expect = 0.088
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 429
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 38.3 bits (85), Expect = 0.007
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Frame = +1
Query: 187 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESI---- 351
+G+A +GG D D + A DDRK+ V +S + T +L+ F YG+I S
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
Query: 352 -NVKTD-----PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIF 513
KT P R+ G A I FK E D+ A + K D + +
Sbjct: 146 EEKKTSVFGTLPKHSRNCGTATITFKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKK 203
Query: 514 VGGLSSEISDD 546
GG +SDD
Sbjct: 204 RGGKGLVLSDD 214
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +1
Query: 253 DDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 432
D K+F+GGL T ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 433 VMA 441
+A
Sbjct: 347 AIA 349
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +1
Query: 253 DDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 432
D K+F+GGL T ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 433 VMA 441
+A
Sbjct: 347 AIA 349
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +1
Query: 253 DDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 432
D K+F+GGL T ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 433 VMA 441
+A
Sbjct: 322 AIA 324
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +1
Query: 253 DDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 432
D K+F+GGL T ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 433 VMA 441
+A
Sbjct: 325 AIA 327
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 253 DDDRKLFVGGLSWETTXKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 429
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 430 KVMAAG----EHTINNKKVDPK 483
+ ++ H NNK+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYGEI 342
RK+F+GGL + + +++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 259 DRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 438
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 439 AAGEH 453
A EH
Sbjct: 72 TACEH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 35.9 bits (79), Expect = 0.038
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 262 RKLFVGGLSWETTXKELRDHFGAYG 336
RK+FVGG+ W+ T L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSR 387
G + + S + D R+L V + ++ +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 388 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 507
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +1
Query: 208 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSR 387
G + + S + D R+L V + ++ +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 388 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 507
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 423
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 424 IDKVMAAGEHTINN 465
+ K+M+A N
Sbjct: 266 VIKLMSACHRNSQN 279
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/82 (21%), Positives = 33/82 (40%)
Frame = +1
Query: 319 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 498
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 499 HGKIFVGGLSSEISDDEIRNFF 564
K+FVGG+S ++ I FF
Sbjct: 204 SNKVFVGGISHMMNRKIINKFF 225
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 423
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 424 IDKVMAAGEHTINN 465
+ K+M+A N
Sbjct: 266 VIKLMSACHRNSQN 279
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/82 (21%), Positives = 33/82 (40%)
Frame = +1
Query: 319 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 498
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 499 HGKIFVGGLSSEISDDEIRNFF 564
K+FVGG+S ++ I FF
Sbjct: 204 SNKVFVGGISHMMNRKIINKFF 225
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 265 KLFVGGLSWETTXKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 423
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 424 IDKVMAAGEHTINN 465
+ K+M+A N
Sbjct: 266 VIKLMSACHRNSQN 279
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/82 (21%), Positives = 33/82 (40%)
Frame = +1
Query: 319 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 498
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 499 HGKIFVGGLSSEISDDEIRNFF 564
K+FVGG+S ++ I FF
Sbjct: 204 SNKVFVGGISHMMNRKIINKFF 225
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 417
+ + +F+ LS++T + +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +1
Query: 268 LFVGGLSWETTXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 447
L+VG LS+ T ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 448 EHTINNKKVDPKKAKARHGKIFVGG 522
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +1
Query: 256 DDRKLFVGGLSWETTXKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 411
++R+++VG + ++ T KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 DDRKLFVGGLSWET-TXKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 432
+ ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 433 VM 438
++
Sbjct: 87 LL 88
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 172 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGEIESI 351
T+N + N GG + N P +L G + WE K+++D F +YG I+
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 352 N--VKTDPNTGRSRGFAFIVFKAPESI 426
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 587 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRA 730
++ + D+ KGF ++TFE+EQ +N + G + + V RA
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 693 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 580
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 142 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 267
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 142 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 267
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQ 661
++G I + DK N KG+ F+ FES Q
Sbjct: 129 KYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 569 EFGTILEVEMPFDKTKNQRKGFCFITFESEQ 661
++G I + DK N KG+ F+ FES Q
Sbjct: 103 KYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -1
Query: 357 YINTLYFTVCSKMITELLXXGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 199
Y NT TV +K + E + PT K ++ SW +S V + + T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = -3
Query: 379 CLCLDLSLH*YSLFHRMLQNDHGAPXXWSPSSAHQQKVFCRH 254
C+ +++++ +SLF +++ H W P S ++ RH
Sbjct: 548 CMLAEMAMNEFSLFSGIVEKFHAIVGPWMPESESHRRRASRH 589
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 505 KIFVGGLSSEISDDEIRNFF 564
K+FVGGL S + + +I NFF
Sbjct: 89 KVFVGGLPSCVKESDILNFF 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,266,226
Number of Sequences: 27780
Number of extensions: 349433
Number of successful extensions: 1306
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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