Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_H22
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.010
U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of ap... 38 0.010
Z74045-2|CAA98553.1| 155|Caenorhabditis elegans Hypothetical pr... 35 0.067
U85911-1|AAB94330.1| 155|Caenorhabditis elegans inhibitor of ap... 35 0.067
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 4.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 4.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 4.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 4.4
>Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical
protein C50B8.2 protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 466 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 618
T E+LAR GFY + C FC +EI + + DDP H+ +P C FV
Sbjct: 45 TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 439 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 609
FD+ T ++LA+ G++ + + D+ C FC VE+ + E DDP +H++++ C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237
Query: 610 PFVR 621
F++
Sbjct: 238 DFIK 241
>U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 466 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 618
T E+LAR GFY + C FC +EI + + DDP H+ +P C FV
Sbjct: 45 TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 439 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 609
FD+ T ++LA+ G++ + + D+ C FC VE+ + E DDP +H++++ C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237
Query: 610 PFVR 621
F++
Sbjct: 238 DFIK 241
>Z74045-2|CAA98553.1| 155|Caenorhabditis elegans Hypothetical
protein T27F2.3 protein.
Length = 155
Score = 35.1 bits (77), Expect = 0.067
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +1
Query: 397 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 561
DM ++RL TF D+ P T + +A+ GFY G C AFC E+
Sbjct: 10 DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68
Query: 562 EGDDPAADHRRWAPQCPFVR 621
E DDP +H + C FVR
Sbjct: 69 E-DDPWYEHTKRDEPCEFVR 87
>U85911-1|AAB94330.1| 155|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 155
Score = 35.1 bits (77), Expect = 0.067
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +1
Query: 397 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 561
DM ++RL TF D+ P T + +A+ GFY G C AFC E+
Sbjct: 10 DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68
Query: 562 EGDDPAADHRRWAPQCPFVR 621
E DDP +H + C FVR
Sbjct: 69 E-DDPWYEHTKRDEPCEFVR 87
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 394 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 492
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 394 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 492
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 394 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 492
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 394 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 492
P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,742,288
Number of Sequences: 27780
Number of extensions: 363292
Number of successful extensions: 901
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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