Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_H18
         (868 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060388-1|AAL25427.1|  241|Drosophila melanogaster LD29159p pro...    58   1e-08
AE014298-3179|AAF50951.1|  241|Drosophila melanogaster CG14613-P...    58   1e-08
BT010065-1|AAQ22534.1|  323|Drosophila melanogaster LD13945p pro...    30   4.7  
AF001464-1|AAB58237.1|  323|Drosophila melanogaster caspase-1 pr...    30   4.7  
AE013599-3628|AAF47027.1|  323|Drosophila melanogaster CG5370-PA...    30   4.7  

>AY060388-1|AAL25427.1|  241|Drosophila melanogaster LD29159p
           protein.
          Length = 241

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 22/39 (56%), Positives = 27/39 (69%)
 Frame = +1

Query: 370 EEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYY 486
           E   +GL  +FK MY+ YWYVL+PVH+ TS  WFG  YY
Sbjct: 101 EAANMGLFAKFKHMYKQYWYVLIPVHVLTSVGWFGGFYY 139



 Score = 37.1 bits (82), Expect = 0.031
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +2

Query: 614 VTETLLKPLKESGAGYFALAFALYKLVTPLRYQLXL 721
           ++E +++ ++ S  G++A+A+  YK+ TPLRY L L
Sbjct: 156 LSENIIEKVQGSDMGHYAIAYLCYKVATPLRYALTL 191


>AE014298-3179|AAF50951.1|  241|Drosophila melanogaster CG14613-PA
           protein.
          Length = 241

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 22/39 (56%), Positives = 27/39 (69%)
 Frame = +1

Query: 370 EEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYY 486
           E   +GL  +FK MY+ YWYVL+PVH+ TS  WFG  YY
Sbjct: 101 EAANMGLFAKFKHMYKQYWYVLIPVHVLTSVGWFGGFYY 139



 Score = 37.1 bits (82), Expect = 0.031
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +2

Query: 614 VTETLLKPLKESGAGYFALAFALYKLVTPLRYQLXL 721
           ++E +++ ++ S  G++A+A+  YK+ TPLRY L L
Sbjct: 156 LSENIIEKVQGSDMGHYAIAYLCYKVATPLRYALTL 191


>BT010065-1|AAQ22534.1|  323|Drosophila melanogaster LD13945p
           protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -1

Query: 439 EVTHTSNPCTFL*I--SGSNQLFSLLPAWVSLDRSLKYMVSSLKSLLAGNPVMAYSQNCD 266
           E+ HT N C  + I   G +           LD    Y  ++    LAG P + + Q C 
Sbjct: 138 ELDHTDNDCLAVAILSHGEHGYLYAKDTQYKLDNIWHYFTATFCPSLAGKPKLFFIQACQ 197

Query: 265 GNKL 254
           G++L
Sbjct: 198 GDRL 201


>AF001464-1|AAB58237.1|  323|Drosophila melanogaster caspase-1
           protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -1

Query: 439 EVTHTSNPCTFL*I--SGSNQLFSLLPAWVSLDRSLKYMVSSLKSLLAGNPVMAYSQNCD 266
           E+ HT N C  + I   G +           LD    Y  ++    LAG P + + Q C 
Sbjct: 138 ELDHTDNDCLAVAILSHGEHGYLYAKDTQYKLDNIWHYFTATFCPSLAGKPKLFFIQACQ 197

Query: 265 GNKL 254
           G++L
Sbjct: 198 GDRL 201


>AE013599-3628|AAF47027.1|  323|Drosophila melanogaster CG5370-PA
           protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -1

Query: 439 EVTHTSNPCTFL*I--SGSNQLFSLLPAWVSLDRSLKYMVSSLKSLLAGNPVMAYSQNCD 266
           E+ HT N C  + I   G +           LD    Y  ++    LAG P + + Q C 
Sbjct: 138 ELDHTDNDCLAVAILSHGEHGYLYAKDTQYKLDNIWHYFTATFCPSLAGKPKLFFIQACQ 197

Query: 265 GNKL 254
           G++L
Sbjct: 198 GDRL 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,768,606
Number of Sequences: 53049
Number of extensions: 636465
Number of successful extensions: 1530
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)