Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_H13
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   2.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.9  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   6.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.5  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   8.5  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 679 IQVIQIGHAAVCFNFIWLF 623
           +Q + I HA +  +F+W++
Sbjct: 7   MQALSIRHAVILASFVWIY 25


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 457 HCAVNLGNGKFGV 419
           HCA  +G G++G+
Sbjct: 595 HCAEEIGRGQYGI 607


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 457 HCAVNLGNGKFGV 419
           HCA  +G G++G+
Sbjct: 633 HCAEEIGRGQYGI 645


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 423 PNLPLPKLTAQCMLSFVMKMK*QVIQHYFIST 518
           P  P+P +T+ C+ S    +K     HY + T
Sbjct: 181 PEPPVPTVTSACVGSAYTPLKEDHDDHYGVPT 212


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 256 APEQSSVYEYNPSNFKF-QIEEMDGNFIMFY 345
           APE  ++++Y PS+ +  ++   D  F   Y
Sbjct: 408 APEVENIWDYTPSSLELGEVAVHDPVFYQLY 438


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/57 (21%), Positives = 25/57 (43%)
 Frame = +2

Query: 542 YKGTRDLPSLTLFLSEAFSVKTEGKQSKQPNEVKTYSGMSYLNDLNIEKFVSKGQHF 712
           YK  R+         E    + E ++SK+P  + + S  +  N+ N   + +K  ++
Sbjct: 272 YKNEREYRKYGKTSKERSRDRMERERSKEPKIISSLSNKTIHNNNNYNNYNNKKLYY 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,020
Number of Sequences: 438
Number of extensions: 5458
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)