BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_H07
(937 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 0.27
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 4.4
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 28.7 bits (61), Expect = 0.27
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXG 514
G GGGGG S GP PG G G G + G GG G
Sbjct: 210 GAPGGGGGSSG----GPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 4.4
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 435 GGXXXGXXSGSPPXXXRPPXGXGGGXXSGXPXGG 536
GG G SG+ G GGG SG P GG
Sbjct: 672 GGGAVGGGSGAGGGAGSS-GGSGGGLASGSPYGG 704
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,150
Number of Sequences: 2352
Number of extensions: 9264
Number of successful extensions: 129
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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