Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_H07
(937 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.13
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.13
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.22
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 33 0.39
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.68
Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.90
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.90
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.1
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 30 2.7
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 30 2.7
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 30 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.6
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 4.8
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 25 5.0
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 25 5.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.3
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 29 6.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.3
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 28 8.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 8.3
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 28 8.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 8.3
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 28 8.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 8.3
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 28 8.3
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 28 8.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 8.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 8.3
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXG-PXF*XXEXPPPPPPXP 370
P PPP P P P P P G P PPPPPP P
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 506 PPPPXRGPXVXGGGTXXAPXXPPPFXRG 423
PPPP G G G P PPP G
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXG-PXF*XXEXPPPPPPXP 370
P PPP P P P P P G P PPPPPP P
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 506 PPPPXRGPXVXGGGTXXAPXXPPPFXRG 423
PPPP G G G P PPP G
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = -2
Query: 507 PPPXR---PGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXPXXXXE 355
PPP R P K P P PL P P PPPPPP P E
Sbjct: 475 PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQE 528
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.22
Identities = 26/93 (27%), Positives = 26/93 (27%)
Frame = -1
Query: 703 PPXXXGGGFFVXXXQGGGXFGXTPXTXPFYGXWPFXGXXFXXFXPXFXPXXXVXXXPPLG 524
PP G F Q G P F G P P PP G
Sbjct: 369 PPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQG 428
Query: 523 XPDXXPPPXPXGGRXXLGGEPEXXPXXXPPXPG 425
P PP P GG G P P P PG
Sbjct: 429 GPGGFGPPPP-GGPGAYGPPPTGFPPVGAPPPG 460
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/68 (36%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPX----PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEX 394
P G P P G P PPP PG G P P P PG P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCP------- 769
Query: 393 PPPPPPXP 370
PPPPPP P
Sbjct: 770 PPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPX--PLXPGXGPXF*XXEXPPPPPP 376
P PPP G GG P P P P P PPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -1
Query: 535 PPLGXPDXXPPPXPXGGRXXLGGEPEXXPXXXPPXPGXWPXFLXPGK 395
PP G P PPP P G G P P P P +L P K
Sbjct: 764 PPGGCPP--PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 783 PXXAXLPGKXXPXFFPXXKXGXXSXXPPPGXXPPXXXXXPPPXXXG 920
P P P P G PPPG PP PP G
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/68 (36%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPX----PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEX 394
P G P P G P PPP PG G P P P PG P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCP------- 769
Query: 393 PPPPPPXP 370
PPPPPP P
Sbjct: 770 PPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPX--PLXPGXGPXF*XXEXPPPPPP 376
P PPP G GG P P P P P PPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -1
Query: 535 PPLGXPDXXPPPXPXGGRXXLGGEPEXXPXXXPPXPGXWPXFLXPGK 395
PP G P PPP P G G P P P P +L P K
Sbjct: 764 PPGGCPP--PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 808
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 783 PXXAXLPGKXXPXFFPXXKXGXXSXXPPPGXXPPXXXXXPPPXXXG 920
P P P P G PPPG PP PP G
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/68 (36%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPX----PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEX 394
P G P P G P PPP PG G P P P PG P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCP------- 352
Query: 393 PPPPPPXP 370
PPPPPP P
Sbjct: 353 PPPPPPPP 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPX--PLXPGXGPXF*XXEXPPPPPP 376
P PPP G GG P P P P P PPPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -1
Query: 535 PPLGXPDXXPPPXPXGGRXXLGGEPEXXPXXXPPXPGXWPXFLXPGK 395
PP G P PPP P G G P P P P +L P K
Sbjct: 347 PPGGCPP--PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKK 391
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 783 PXXAXLPGKXXPXFFPXXKXGXXSXXPPPGXXPPXXXXXPPPXXXG 920
P P P P G PPPG PP PP G
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXG 514
G GGGGG + G RG G G PP P R GGG G
Sbjct: 842 GGGGGGGSYHQPYNQDQRRGGRGGGGG-----PPGYQRPPYRGGGGGG 884
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXG 514
G GGGGGG++ G G R G G Q G GGG G
Sbjct: 786 GGGGGGGGYNDRQDFGRNYGGR-DGGGPQRYHDQQQQRQGGYQGGGYG 832
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 525 GXXXPXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXP 370
G P PPP P G P P P+ G PPPPPP P
Sbjct: 555 GTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGG----------PPPPPPPP 596
>Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical
protein M7.10 protein.
Length = 220
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 599 KGPXTVKRPXXXRXPKGPXPLXXPHKKPP 685
KGP ++RP + PKGP PH KPP
Sbjct: 172 KGPGGLRRPKGPKGPKGP---GGPHGKPP 197
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 507 PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXP 370
PPP PG G P P P P GP PPPPP P
Sbjct: 334 PPPPPPGMRYPGG----MPPPPPPRYPSAGPGM----YPPPPPSRP 371
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPP 382
P P P P PPP PG G P P P GP PPPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR--FGPPGMGGMPPPPP 338
Query: 381 P 379
P
Sbjct: 339 P 339
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPX--PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPP 388
P G P P G P PPP P G P P P G PP
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM----IPP 383
Query: 387 PPPP 376
PPPP
Sbjct: 384 PPPP 387
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/95 (24%), Positives = 24/95 (25%), Gaps = 3/95 (3%)
Frame = +3
Query: 633 GVXPKXPPPXXXXTKNPPPX*XGGXPXXXXXXXXXXXXXXXXXXXXXSXXPXXAXLPGKX 812
G P PPP T PPP P +PG
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 813 XPX---FFPXXKXGXXSXXPPPGXXPPXXXXXPPP 908
P F G PPPG P PPP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 507 PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXP 370
PPP PG G P P P P GP PPPPP P
Sbjct: 344 PPPPPPGMRYPGG----MPPPPPPRYPSAGPGM----YPPPPPSRP 381
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPP 382
P P P P PPP PG G P P P GP PPPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR--FGPPGMGGMPPPPP 348
Query: 381 P 379
P
Sbjct: 349 P 349
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPX--PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPP 388
P G P P G P PPP P G P P P G PP
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM----IPP 393
Query: 387 PPPP 376
PPPP
Sbjct: 394 PPPP 397
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/95 (24%), Positives = 24/95 (25%), Gaps = 3/95 (3%)
Frame = +3
Query: 633 GVXPKXPPPXXXXTKNPPPX*XGGXPXXXXXXXXXXXXXXXXXXXXXSXXPXXAXLPGKX 812
G P PPP T PPP P +PG
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 813 XPX---FFPXXKXGXXSXXPPPGXXPPXXXXXPPP 908
P F G PPPG P PPP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/114 (27%), Positives = 32/114 (28%), Gaps = 3/114 (2%)
Frame = +3
Query: 378 GXXGXXFP-GXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGGGXXSG--XPXGGKXXT 548
G G P G G PG G SG PP P G +G P G
Sbjct: 165 GPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSG----A 220
Query: 549 XKXGXKXGKKXXXKXPXKGXXP*KGXVXGVXPKXPPPXXXXTKNPPPX*XGGXP 710
G G P G P G P PP PP GG P
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP--SGGPP 272
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/114 (27%), Positives = 32/114 (28%), Gaps = 3/114 (2%)
Frame = +3
Query: 378 GXXGXXFP-GXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGGGXXSGXPXG--GKXXT 548
G G P G + G PG SG PP P G SG P G
Sbjct: 300 GPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPG----PFDPSGAPPSGGPPGPFNPSGA 355
Query: 549 XKXGXKXGKKXXXKXPXKGXXP*KGXVXGVXPKXPPPXXXXTKNPPPX*XGGXP 710
G G P G P G P PP PP GG P
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP--SGGPP 407
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/114 (27%), Positives = 31/114 (27%), Gaps = 3/114 (2%)
Frame = +3
Query: 378 GXXGXXFP-GXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGGGXXSGXPXG--GKXXT 548
G G P G G PG SG PP P G SG P G
Sbjct: 390 GPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG----PFNPSGAPPSGGPPGPFNPSGA 445
Query: 549 XKXGXKXGKKXXXKXPXKGXXP*KGXVXGVXPKXPPPXXXXTKNPPPX*XGGXP 710
G G P G P G P PP PP GG P
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP--SGGPP 497
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXGIXXPQXGXXG 544
G GGGGGG G G G G PP G GGG G G G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGG 81
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXG 514
G GGGGGG G G G G PP G GGG G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG 70
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -2
Query: 543 PFXPXWGXXXPXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPP 376
P P P PPP P P P P+ PG P PPPPPP
Sbjct: 491 PPMPSINGHAPNPPPPPP--LLGIAPMSTNAPPPPPM-PGMAPLSTGAPTPPPPPP 543
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPXPLXPGX--GPXF*XXEXPPPPPPXP 370
P PPP P GG P P L G G PPPPPP P
Sbjct: 536 PTPPPPPPVGMAN-GGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPP 584
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 507 PPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXP 370
PPP PG G P P P+ G PPPPPP P
Sbjct: 521 PPPPMPGMAPLSTG-APTPPPPPPVGMANG-------GPPPPPPLP 558
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 436 GGGXWGALXVPPPXTXGPRXGGGGXXXXAPP 528
GGG G PPP G GGGG APP
Sbjct: 23 GGGGCGCAPPPPPPACG--CGGGGGGYAAPP 51
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = -2
Query: 507 PPPXR---PGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXPXXXXE 355
PPP R P K P P PL P P PPPPPP P E
Sbjct: 468 PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPS----SVPPPPPPPPALEQE 517
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPXPLXP-GXGPXF*XXEXPPPPPPXP 370
P PPP G N P P PL P G G PPPPPP P
Sbjct: 216 PAPPPPIGGIAPV---NAHGAPPPPPLPPVGAGAP-----PPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPXPLXP-GXGPXF*XXEXPPPPPPXP 370
P PPP G N P P PL P G G PPPPPP P
Sbjct: 202 PAPPPPIGGIAPV---NAHGAPPPPPLPPVGAGAP-----PPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -2
Query: 513 PXPPPXRPGAXXXWGGNXKXXPXPXPLXP-GXGPXF*XXEXPPPPPPXP 370
P PPP G N P P PL P G G PPPPPP P
Sbjct: 202 PAPPPPIGGIAPV---NAHGAPPPPPLPPVGAGAP-----PPPPPPPPP 242
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXGIXXPQXGXXGYP 550
G GGGGGGFS + G G + G F Q P + GG P P
Sbjct: 34 GGGGGGGGFSSRGQSGSRTGVQQGTGGGGFN-NNQGGFHPNQGSGGFNQPRPNNNFNNNP 92
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXGIXXPQXGXXGYP 550
G GGGGGGFS + G G + G F Q P + GG P P
Sbjct: 34 GGGGGGGGFSSRGQSGSRTGVQQGTGGGGFN-NNQGGFHPNQGSGGFNQPRPNNNFNNNP 92
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXGIXXPQXGXXGYP 550
G GGGGGGFS + G G + G F Q P + GG P P
Sbjct: 34 GGGGGGGGFSSRGQSGSRTGVQQGTGGGGFN-NNQGGFHPNQGSGGFNQPRPNNNFNNNP 92
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -2
Query: 534 PXWGXXXPXPPPXRPGAXXXWGGNXKXXPX--PXPLXPGXGPXF*XXEXPPPPPP 376
P G P PPP G+ P P P G P PPPPPP
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 6/103 (5%)
Frame = +3
Query: 399 PGXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGG------GXXSGXPXGGKXXTXKXG 560
P ++ Q P + +GSPP RPP G G P GG + G
Sbjct: 331 PPPRQKRQAPERSPPTGSPPTGSPPTG-RPPRGGPGKSSEESSESREGPRGGPRGGPRGG 389
Query: 561 XKXGKKXXXKXPXKGXXP*KGXVXGVXPKXPPPXXXXTKNPPP 689
+ + + + P + G P PP + PP
Sbjct: 390 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 432
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -2
Query: 534 PXWGXXXPXPPPXRPGAXXXWGGNXKXXPX--PXPLXPGXGPXF*XXEXPPPPPP 376
P G P PPP G+ P P P G P PPPPPP
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 6/103 (5%)
Frame = +3
Query: 399 PGXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGG------GXXSGXPXGGKXXTXKXG 560
P ++ Q P + +GSPP RPP G G P GG + G
Sbjct: 352 PPPRQKRQAPERSPPTGSPPTGSPPTG-RPPRGGPGKSSEESSESREGPRGGPRGGPRGG 410
Query: 561 XKXGKKXXXKXPXKGXXP*KGXVXGVXPKXPPPXXXXTKNPPP 689
+ + + + P + G P PP + PP
Sbjct: 411 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 453
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -2
Query: 534 PXWGXXXPXPPPXRPGAXXXWGGNXKXXPX--PXPLXPGXGPXF*XXEXPPPPPP 376
P G P PPP G+ P P P G P PPPPPP
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 6/103 (5%)
Frame = +3
Query: 399 PGXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGG------GXXSGXPXGGKXXTXKXG 560
P ++ Q P + +GSPP RPP G G P GG + G
Sbjct: 337 PPPRQKRQAPERSPPTGSPPTGSPPTG-RPPRGGPGKSSEESSESREGPRGGPRGGPRGG 395
Query: 561 XKXGKKXXXKXPXKGXXP*KGXVXGVXPKXPPPXXXXTKNPPP 689
+ + + + P + G P PP + PP
Sbjct: 396 PRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 438
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXG--GGXGIXXPQXGXXG 544
G GGGG++ G G G G + P G G GG G G G
Sbjct: 173 GGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
Query: 545 YPXXRG 562
Y G
Sbjct: 233 YATSGG 238
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXG--GGXGIXXPQXGXXG 544
G GGGG++ G G G G + P G G GG G G G
Sbjct: 173 GGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
Query: 545 YPXXRG 562
Y G
Sbjct: 233 YATSGG 238
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -2
Query: 561 PRFXGXPFXPXWGXXXPXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPP 382
P G P P P P G G N P P GP + PPP
Sbjct: 86 PGMAGPPLLP------PAVAPPTNGQETLVGINNPVQPPPPVQYQNQGPQYIEAPPPPPS 139
Query: 381 PPXP 370
PP P
Sbjct: 140 PPPP 143
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 25.0 bits (52), Expect(2) = 5.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 399 EXPPPPPPXP 370
E PPPPPP P
Sbjct: 305 ESPPPPPPPP 314
Score = 22.2 bits (45), Expect(2) = 5.0
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -2
Query: 450 PXPXPLXPGXGPXF*XXEXPPPPPP 376
P + P P PPPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPPPP 313
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 25.0 bits (52), Expect(2) = 5.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 399 EXPPPPPPXP 370
E PPPPPP P
Sbjct: 305 ESPPPPPPPP 314
Score = 22.2 bits (45), Expect(2) = 5.0
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -2
Query: 450 PXPXPLXPGXGPXF*XXEXPPPPPP 376
P + P P PPPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPPPP 313
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 527 GGAXXXXPPPPXRGPXVXGGGTXXA-PXXPP 438
GG PPPP P GGG A P PP
Sbjct: 24 GGGCGCAPPPPPPSPCGCGGGGGLALPQLPP 54
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = -2
Query: 534 PXWGXXXPXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXP 370
P G PPP P GG+ P P + P PP PP P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/61 (36%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +2
Query: 371 GXGGGGGGFS-XX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGGXGIXXPQXGXXGY 547
G GGGGGG S P G G G A GGG G PQ G G
Sbjct: 240 GGGGGGGGQSNNNSSFSSVPAFNGGGGGGG---GMNVGAAGFGGGGGQGYGGPQFGGQGG 296
Query: 548 P 550
P
Sbjct: 297 P 297
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 379 GXXGXXFXGLKXRAXPRXKGGGXWGALXVPPPXTXGPRXGGGG 507
G G G R P GGG WG G R GGGG
Sbjct: 134 GGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGG 176
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 535 PP--LGXPDXXPPPXPXGGRXXLGGEPEXXPXXXPPXPGXWPXFLXP 401
PP +G P PP P GG LGG P PP P P P
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGG-PGRGGNRGPPGPRGPPGEAGP 188
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 535 PP--LGXPDXXPPPXPXGGRXXLGGEPEXXPXXXPPXPGXWPXFLXP 401
PP +G P PP P GG LGG P PP P P P
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGG-PGRGGNRGPPGPRGPPGEAGP 188
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.3
Identities = 28/115 (24%), Positives = 29/115 (25%), Gaps = 1/115 (0%)
Frame = +2
Query: 344 QQXXSXXXXGXGGGGGGFSXX*KXGPXPGXRGXGXG-XXFXFPPQXXXAPGRXGGGXGIX 520
+Q S G GGGGGG P P G G P APG G G
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP 138
Query: 521 XPQXGXXGYPXXRGKTXXKTXKXXAXKGPXTVKRPXXXRXPKGPXPLXXPHKKPP 685
G P P P GP P P P
Sbjct: 139 CEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +2
Query: 488 PGRXG--GGXGIXXPQX--GXXGYPXXRGKTXXKTXKXXAXKGPXTVKRPXXXRXPKGPX 655
PGR G G G PQ G G P +G + KGP P + P G
Sbjct: 173 PGRPGKPGRVGDAGPQGEPGEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSN 232
Query: 656 PLXXPHKKPP 685
L + PP
Sbjct: 233 GLPSQNSGPP 242
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 8.3
Identities = 28/115 (24%), Positives = 29/115 (25%), Gaps = 1/115 (0%)
Frame = +2
Query: 344 QQXXSXXXXGXGGGGGGFSXX*KXGPXPGXRGXGXG-XXFXFPPQXXXAPGRXGGGXGIX 520
+Q S G GGGGGG P P G G P APG G G
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP 138
Query: 521 XPQXGXXGYPXXRGKTXXKTXKXXAXKGPXTVKRPXXXRXPKGPXPLXXPHKKPP 685
G P P P GP P P P
Sbjct: 139 CEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +2
Query: 488 PGRXG--GGXGIXXPQX--GXXGYPXXRGKTXXKTXKXXAXKGPXTVKRPXXXRXPKGPX 655
PGR G G G PQ G G P +G + KGP P + P G
Sbjct: 173 PGRPGKPGRVGDAGPQGEPGEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSN 232
Query: 656 PLXXPHKKPP 685
L + PP
Sbjct: 233 GLPSQNSGPP 242
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 8.3
Identities = 28/115 (24%), Positives = 29/115 (25%), Gaps = 1/115 (0%)
Frame = +2
Query: 344 QQXXSXXXXGXGGGGGGFSXX*KXGPXPGXRGXGXG-XXFXFPPQXXXAPGRXGGGXGIX 520
+Q S G GGGGGG P P G G P APG G G
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP 138
Query: 521 XPQXGXXGYPXXRGKTXXKTXKXXAXKGPXTVKRPXXXRXPKGPXPLXXPHKKPP 685
G P P P GP P P P
Sbjct: 139 CEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGG 508
G GGGGGG+ + G G G G + G+ GGG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGG 266
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.3
Identities = 28/115 (24%), Positives = 29/115 (25%), Gaps = 1/115 (0%)
Frame = +2
Query: 344 QQXXSXXXXGXGGGGGGFSXX*KXGPXPGXRGXGXG-XXFXFPPQXXXAPGRXGGGXGIX 520
+Q S G GGGGGG P P G G P APG G G
Sbjct: 79 RQAYSTGGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP 138
Query: 521 XPQXGXXGYPXXRGKTXXKTXKXXAXKGPXTVKRPXXXRXPKGPXPLXXPHKKPP 685
G P P P GP P P P
Sbjct: 139 CEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGG 508
G GGGGGG+ + G G G G + G+ GGG
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGG 228
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 371 GXGGGGGGFSXX*KXGPXPGXRGXGXGXXFXFPPQXXXAPGRXGGG 508
G GGGGGG+ + G G G G + G+ GGG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGG 266
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 543 PFXPXWGXXXPXPPPXRPGAXXXWGGNXKXXPXPXPLXPGXGPXF*XXEXPPPPPPXP 370
P P P PPP P P P P P P PPPPPP P
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP-PPLFSPSM---ILPPPPPPLP 1397
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 387 GXXFPGXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGGGXXSGXPXGG 536
G P G GG PP PP GGG P GG
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 387 GXXFPGXKKXGQXPGKGGXXXGXXSGSPPXXXRPPXGXGGGXXSGXPXGG 536
G P G GG PP PP GGG P GG
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,816,714
Number of Sequences: 27780
Number of extensions: 288839
Number of successful extensions: 3077
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2160
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -