Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_H04
         (907 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3605|AAF47005.2|  459|Drosophila melanogaster CG5357-PA...    33   0.71 
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-...    29   6.6  

>AE013599-3605|AAF47005.2|  459|Drosophila melanogaster CG5357-PA
           protein.
          Length = 459

 Score = 32.7 bits (71), Expect = 0.71
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 228 RPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIP 338
           R RS     +TN+ SS  +GSGG   R T +   Q+P
Sbjct: 71  RSRSHFLHGSTNSSSSSGIGSGGGTTRLTLIPPTQLP 107


>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
            protein.
          Length = 16223

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 183  AAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKT 344
            +A+E    E+P   L   S  + KT N  SSQSV    +++  T      +P++
Sbjct: 8719 SAEENQMTEVPWTVLTSLSQSSSKTKNIFSSQSVNEDKTSQEDTRTLSISVPQS 8772



 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 183  AAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKT 344
            +A+E    E+P      RS  + KT N  SSQSV     ++  T      +P++
Sbjct: 2422 SAEENQMTEVPWTLSTSRSQSSSKTKNIFSSQSVNDDNISQEDTRTLSISVPQS 2475



 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 183  AAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKT 344
            +A+E    E+P   L   S  + KT N  SSQSV    +++  T      +P++
Sbjct: 4353 SAEENQTTEVPWTVLTSLSQSSSKTKNIFSSQSVNEDKTSQEDTRTLPISVPQS 4406


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,443,999
Number of Sequences: 53049
Number of extensions: 367607
Number of successful extensions: 1120
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)