BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_H01
(896 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 41 0.003
X97197-1|CAA65831.1| 366|Drosophila melanogaster spliceosomal p... 37 0.043
BT023489-1|AAY84889.1| 347|Drosophila melanogaster RE50839p pro... 37 0.043
AE014298-857|AAF46136.1| 347|Drosophila melanogaster CG3780-PA ... 37 0.043
BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p pro... 32 1.2
AE013599-668|AAF59075.1| 952|Drosophila melanogaster CG14748-PA... 32 1.2
BT011530-1|AAS15666.1| 145|Drosophila melanogaster RE20733p pro... 31 1.6
AE013599-2439|AAM68499.1| 145|Drosophila melanogaster CG30458-P... 31 1.6
AY058599-1|AAL13828.1| 773|Drosophila melanogaster LD29226p pro... 30 3.7
AE013599-3146|AAF46686.2| 1215|Drosophila melanogaster CG4266-PA... 30 3.7
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 30 4.9
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 30 4.9
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 30 4.9
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 30 4.9
U31961-5|AAA84404.1| 424|Drosophila melanogaster protein ( Dros... 29 8.6
AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-P... 29 8.6
AE014297-1113|AAN13463.2| 597|Drosophila melanogaster CG3985-PE... 29 8.6
AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD... 29 8.6
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 40.7 bits (91), Expect = 0.003
Identities = 29/83 (34%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Frame = +2
Query: 647 KPDRTIKIPGVSPLESSXVR--PPVPDPAALPDTCPPFFPSGKRGAFSYLPPVG-----I 805
+P T P PL R PP P P P T PP P R +YLPP +
Sbjct: 250 RPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPV 309
Query: 806 XXRLXVVPPPXWAXXP-NPPVXP 871
RL PPP P PP P
Sbjct: 310 TTRLPPPPPPPRTPPPTRPPTKP 332
Score = 38.3 bits (85), Expect = 0.014
Identities = 26/74 (35%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +2
Query: 647 KPDRTIKIPGVSPLESSXVR--PPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLX 820
+P T P PL R PP P P P T PP P R +YLPP
Sbjct: 293 RPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPPATYLPPTN------ 346
Query: 821 VVPPPXWAXXPNPP 862
PPP P PP
Sbjct: 347 KPPPPVTTRRPTPP 360
Score = 37.1 bits (82), Expect = 0.033
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Frame = +2
Query: 650 PDRTIKIPGVSPLESSXVR--PPVPDPAALPDTCPPFFPSGKRGAFSYLPPVG--IXXRL 817
P T P PL R PP P P P T PP P R +YLPP +
Sbjct: 208 PPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVT 267
Query: 818 XVVPPPXWAXXPNPPVXP 871
+PPP + PP P
Sbjct: 268 TRLPPPPPSPRTPPPTRP 285
Score = 29.9 bits (64), Expect = 4.9
Identities = 26/75 (34%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Frame = +2
Query: 650 PDRTIKIPGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVP 829
P R P P RPP P P LP T P LPPV RL P
Sbjct: 186 PTRPPTRPPTRPPTRPPTRPPTPPPTYLPPTNKP------------LPPV--TTRLPPPP 231
Query: 830 PPXWAXXP-NPPVXP 871
PP P PP P
Sbjct: 232 PPPRTPPPTRPPTRP 246
>X97197-1|CAA65831.1| 366|Drosophila melanogaster spliceosomal
protein protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.043
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 707 PPVPDPAALPDTCPPFFPSGKRGAFSYLPP-VGIXXRLXVVPPPXWAXXPNPPVXPER 877
PPVP PA P T PP G LPP +GI ++ P WA P P P R
Sbjct: 281 PPVPQPAPFPATIPPPPLPPMTGGQPPLPPAMGIPPPPRMMQPNAWA-PPGMPAPPPR 337
>BT023489-1|AAY84889.1| 347|Drosophila melanogaster RE50839p
protein.
Length = 347
Score = 36.7 bits (81), Expect = 0.043
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 707 PPVPDPAALPDTCPPFFPSGKRGAFSYLPP-VGIXXRLXVVPPPXWAXXPNPPVXPER 877
PPVP PA P T PP G LPP +GI ++ P WA P P P R
Sbjct: 262 PPVPQPAPFPATIPPPPLPPMTGGQPPLPPAMGIPPPPRMMQPNAWA-PPGMPAPPPR 318
>AE014298-857|AAF46136.1| 347|Drosophila melanogaster CG3780-PA
protein.
Length = 347
Score = 36.7 bits (81), Expect = 0.043
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 707 PPVPDPAALPDTCPPFFPSGKRGAFSYLPP-VGIXXRLXVVPPPXWAXXPNPPVXPER 877
PPVP PA P T PP G LPP +GI ++ P WA P P P R
Sbjct: 262 PPVPQPAPFPATIPPPPLPPMTGGQPPLPPAMGIPPPPRMMQPNAWA-PPGMPAPPPR 318
>BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p
protein.
Length = 1028
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 647 KPDRTIKIPGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPP 796
+PDR +P S +SS RPP P+ + PP+ P Y PP
Sbjct: 354 RPDRWETLPSSSGYDSSAYRPPRPETDRIDKYRPPYRPGSDYS--PYRPP 401
>AE013599-668|AAF59075.1| 952|Drosophila melanogaster CG14748-PA
protein.
Length = 952
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 647 KPDRTIKIPGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPP 796
+PDR +P S +SS RPP P+ + PP+ P Y PP
Sbjct: 278 RPDRWETLPSSSGYDSSAYRPPRPETDRIDKYRPPYRPGSDYS--PYRPP 325
>BT011530-1|AAS15666.1| 145|Drosophila melanogaster RE20733p
protein.
Length = 145
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 707 PPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVPPPXWAXXPNPPVXPE 874
PP P + +P PP P+ K +Y+PP + + PPP P PP P+
Sbjct: 33 PPAPVKSYIPPPPPPPPPAPKN---TYIPPPAAPAKAYIPPPP-----PPPPPAPK 80
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 650 PDRTIKIPGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVP 829
P T P +P ++ PP P P A +T P P+ +Y+PP + P
Sbjct: 52 PKNTYIPPPAAPAKAYIPPPPPPPPPAPKNTYIPPAPAPVAPVETYIPPAA-PAPAYIPP 110
Query: 830 PPXWAXXP 853
P A P
Sbjct: 111 APVQAEEP 118
>AE013599-2439|AAM68499.1| 145|Drosophila melanogaster CG30458-PA
protein.
Length = 145
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 707 PPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVPPPXWAXXPNPPVXPE 874
PP P + +P PP P+ K +Y+PP + + PPP P PP P+
Sbjct: 33 PPAPVKSYIPPPPPPPPPAPKN---TYIPPPAAPAKAYIPPPP-----PPPPPAPK 80
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 650 PDRTIKIPGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVP 829
P T P +P ++ PP P P A +T P P+ +Y+PP + P
Sbjct: 52 PKNTYIPPPAAPAKAYIPPPPPPPPPAPKNTYIPPAPAPVAPVETYIPPAA-PAPAYIPP 110
Query: 830 PPXWAXXP 853
P A P
Sbjct: 111 APVQAEEP 118
>AY058599-1|AAL13828.1| 773|Drosophila melanogaster LD29226p
protein.
Length = 773
Score = 30.3 bits (65), Expect = 3.7
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = +2
Query: 641 VAKPDRTIKIPGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLX 820
V P+ I P V P P P P PP RG F PP+GI
Sbjct: 111 VPPPNLIFGIDTTQPPPVGPVGPVGPPPG--PGAPPPGLMGMVRGQFPMAPPMGINMPPP 168
Query: 821 VVPPPXWAXXPNPPVXP 871
++ PP P P + P
Sbjct: 169 IMMPP--TNMPPPMMMP 183
>AE013599-3146|AAF46686.2| 1215|Drosophila melanogaster CG4266-PA
protein.
Length = 1215
Score = 30.3 bits (65), Expect = 3.7
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = +2
Query: 641 VAKPDRTIKIPGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLX 820
V P+ I P V P P P P PP RG F PP+GI
Sbjct: 553 VPPPNLIFGIDTTQPPPVGPVGPVGPPPG--PGAPPPGLMGMVRGQFPMAPPMGINMPPP 610
Query: 821 VVPPPXWAXXPNPPVXP 871
++ PP P P + P
Sbjct: 611 IMMPP--TNMPPPMMMP 625
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
protein protein.
Length = 1091
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/74 (27%), Positives = 25/74 (33%)
Frame = +2
Query: 671 PGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVPPPXWAXX 850
P P + + PP P P PP P G PP + R PPP
Sbjct: 503 PNKLPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPG 562
Query: 851 PNPPVXPERVGLIR 892
P P G++R
Sbjct: 563 MGGPPPPPMPGMMR 576
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
protein.
Length = 1091
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/74 (27%), Positives = 25/74 (33%)
Frame = +2
Query: 671 PGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVPPPXWAXX 850
P P + + PP P P PP P G PP + R PPP
Sbjct: 503 PNKLPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPG 562
Query: 851 PNPPVXPERVGLIR 892
P P G++R
Sbjct: 563 MGGPPPPPMPGMMR 576
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/74 (27%), Positives = 25/74 (33%)
Frame = +2
Query: 671 PGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVPPPXWAXX 850
P P + + PP P P PP P G PP + R PPP
Sbjct: 503 PNKLPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPG 562
Query: 851 PNPPVXPERVGLIR 892
P P G++R
Sbjct: 563 MGGPPPPPMPGMMR 576
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/74 (27%), Positives = 25/74 (33%)
Frame = +2
Query: 671 PGVSPLESSXVRPPVPDPAALPDTCPPFFPSGKRGAFSYLPPVGIXXRLXVVPPPXWAXX 850
P P + + PP P P PP P G PP + R PPP
Sbjct: 503 PNKLPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPG 562
Query: 851 PNPPVXPERVGLIR 892
P P G++R
Sbjct: 563 MGGPPPPPMPGMMR 576
>U31961-5|AAA84404.1| 424|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 424
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 357 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 452
ES +VC G LP+P L C + GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371
>AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-PA
protein.
Length = 417
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 357 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 452
ES +VC G LP+P L C + GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364
>AE014297-1113|AAN13463.2| 597|Drosophila melanogaster CG3985-PE,
isoform E protein.
Length = 597
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/86 (25%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Frame = +2
Query: 608 RASQKSTLKSEVAKPDRTIKIPGVSPLESSXVRPPVP-DPAALPDTCPPFFPSGKRGAFS 784
R L SEV D P P++ +PPV P +P P P+G S
Sbjct: 19 RRFSSGDLSSEVDDVDPNSLPPAARPIQDQPTKPPVAGGPPNMPPPPAPGQPAGAAPELS 78
Query: 785 YLPPVGIXXRLXVVPPPXWAXXPNPP 862
G PP P P
Sbjct: 79 LSFGAGKTPATAAPAPPRGVSAPTSP 104
>AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD,
isoform D protein.
Length = 1041
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/86 (25%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Frame = +2
Query: 608 RASQKSTLKSEVAKPDRTIKIPGVSPLESSXVRPPVP-DPAALPDTCPPFFPSGKRGAFS 784
R L SEV D P P++ +PPV P +P P P+G S
Sbjct: 19 RRFSSGDLSSEVDDVDPNSLPPAARPIQDQPTKPPVAGGPPNMPPPPAPGQPAGAAPELS 78
Query: 785 YLPPVGIXXRLXVVPPPXWAXXPNPP 862
G PP P P
Sbjct: 79 LSFGAGKTPATAAPAPPRGVSAPTSP 104
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,993,277
Number of Sequences: 53049
Number of extensions: 759540
Number of successful extensions: 2612
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2587
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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