Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_G23
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 42 8e-04
U97552-6|AAX55683.1| 216|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 33 0.27
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 33 0.27
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 33 0.27
U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical pr... 32 0.62
U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical pr... 32 0.62
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.82
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.82
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.82
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 29 5.8
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 29 5.8
U88170-11|AAB42249.1| 227|Caenorhabditis elegans Hypothetical p... 29 5.8
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 29 5.8
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 5.8
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 29 5.8
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 5.8
Z67995-4|CAO78723.1| 233|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z50109-5|CAA90438.1| 325|Caenorhabditis elegans Hypothetical pr... 28 7.7
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 7.7
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 7.7
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 28 7.7
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 28 7.7
AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/61 (40%), Positives = 29/61 (47%)
Frame = +1
Query: 520 RFTPQTGTKGIMQRFIASKGKLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRT 699
R +P G+ I FIAS LPP + +ST PP I PS P L P SP T
Sbjct: 278 RVSPSGGSSPISDTFIASPTLLPPSTTLSST------PPTISPSAPTLLPTRSPKSREET 331
Query: 700 P 702
P
Sbjct: 332 P 332
>U97552-6|AAX55683.1| 216|Caenorhabditis elegans Hypothetical
protein W05H7.4c protein.
Length = 216
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 601 AASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYGPRSKRRY 753
A +PNT+I P ++ TP+ AP S + PE + R+ YG K R+
Sbjct: 18 AVGSPNTSIDSPAVYVPTPLTAPSTSKTTPVK-PEDQTTRQKYGGTWKLRH 67
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 583 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKP 714
+PPP + P ++ P + P++ AP+V PP + T + P
Sbjct: 120 VPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPPP 163
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 583 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKP 714
+PPP + P ++ P + P++ AP+V PP + T + P
Sbjct: 143 VPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPPP 186
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 583 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKP 714
+PPP + P ++ P + P++ AP+V PP + T + P
Sbjct: 393 VPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPPP 436
>U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical
protein W05H7.4e protein.
Length = 666
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 601 AASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYG 732
A +PNT+I P ++ TP+ AP S + PE + R+ YG
Sbjct: 18 AVGSPNTSIDSPAVYVPTPLTAPSTSKTTPVK-PEDQTTRQKYG 60
>U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical
protein W05H7.4b protein.
Length = 663
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 601 AASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYG 732
A +PNT+I P ++ TP+ AP S + PE + R+ YG
Sbjct: 18 AVGSPNTSIDSPAVYVPTPLTAPSTSKTTPVK-PEDQTTRQKYG 60
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.82
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +1
Query: 577 GKLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPI----INRTPEGKPVRKGYGPRSK 744
G LPPP S P P P AP SPP P G+P R G G S+
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSE 369
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.82
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +1
Query: 577 GKLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPI----INRTPEGKPVRKGYGPRSK 744
G LPPP S P P P AP SPP P G+P R G G S+
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSE 390
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.82
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +1
Query: 577 GKLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPI----INRTPEGKPVRKGYGPRSK 744
G LPPP S P P P AP SPP P G+P R G G S+
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSE 375
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +1
Query: 595 SNAASTPNT-AIAPPLIFPSTPV-----LAPVVSPPIINRTPEGKPV 717
S ++ P T A PP+ +P P LAP+ PPI+ T +P+
Sbjct: 83 SGVSTAPTTKATLPPITYPPAPTTTTINLAPITYPPILTTTISLEPI 129
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 586 PPPSNAASTPNTAIAPPLI-FPSTPVLAPVVSP-PIINRTPEGKP 714
PPP+N T PP P+ +A +P PI N TP+ P
Sbjct: 270 PPPANTTVTEEKTTVPPATDEPAPKTVATTENPKPIDNSTPQKPP 314
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 589 PPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTP 702
P + ST + PPLI PS+P VS P + TP
Sbjct: 94 PALPSYSTAYSMAPPPLILPSSPSYVAPVSAPSYSLTP 131
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 583 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYG 732
LPPP A + PP + P++ P +PP P+ P++ YG
Sbjct: 990 LPPPRFLAMPMQFSGHPPPVIMGPPIIRPFGAPP-----PQFIPIQSNYG 1034
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 583 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYG 732
LPPP A + PP + P++ P +PP P+ P++ YG
Sbjct: 990 LPPPRFLAMPMQFSGHPPPVIMGPPIIRPFGAPP-----PQFIPIQSNYG 1034
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 586 PPPSNAASTPNTAIAPPLIFPSTPVL---APVVSPPIINRTPEGKPVRKGYGPR 738
P P AA+ A AP P PVL AP ++PP+ P P+ + PR
Sbjct: 80 PAPVLAAAPAFAAPAPVFAAPPAPVLAAPAPFLAPPV----PPVAPIVSAFAPR 129
>U88170-11|AAB42249.1| 227|Caenorhabditis elegans Hypothetical
protein C10G11.10 protein.
Length = 227
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 562 FIASKGKLPPPSNAASTPNTAIAPPLIF-PSTPVLAPVV 675
F +SK K PP A+ T A+ P PSTP+ AP +
Sbjct: 27 FCSSKKKEPPRPIASQTSANALVPQSSSQPSTPIQAPPI 65
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 634 PLIFPSTPVLAPVVSPPIINRTP 702
PLIFP P L P+ +P +N P
Sbjct: 304 PLIFPGRPDLPPITAPSPLNNWP 326
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 616 NTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKP 714
++ + PPL+ TP + V+PP + TP G+P
Sbjct: 194 DSPVVPPLVVTGTPSIV-TVTPPSPSVTPGGRP 225
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 604 ASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYGPRS 741
+ T T P L P PV AP +PP R P +P RKG G ++
Sbjct: 233 SDTAKTFAKPNLAPP--PVKAP--APPKERRVPAARPARKGRGRKN 274
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 616 NTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKP 714
++ + PPL+ TP + V+PP + TP G+P
Sbjct: 117 DSPVVPPLVVTGTPSIV-TVTPPSPSVTPGGRP 148
>Z67995-4|CAO78723.1| 233|Caenorhabditis elegans Hypothetical
protein M153.5 protein.
Length = 233
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 708 PFRRTIDDRRGNYWCQYWSRGEN 640
P + T DRRG WCQ + EN
Sbjct: 107 PMKATCIDRRGGDWCQKMANREN 129
>Z50109-5|CAA90438.1| 325|Caenorhabditis elegans Hypothetical
protein C09H10.7 protein.
Length = 325
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 592 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYG 732
P++A T T P L P+ VL+ V+S I +R+P +R G+G
Sbjct: 254 PNSAGRT--THFDPTLNSPAENVLSEVISSEIDSRSPFTPHLRSGFG 298
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 592 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYGPRS 741
PS + S+P+ + + P PS+P +P SP +P P Y P S
Sbjct: 1652 PSYSPSSPSYSPSSPSYSPSSPRYSP-TSPTYSPTSPTYSPTSPTYSPTS 1700
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 592 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYGPRS 741
PS + S+P+ + + P PS+P +P SP +P P Y P S
Sbjct: 1659 PSYSPSSPSYSPSSPSYSPSSPRYSP-TSPTYSPTSPTYSPTSPTYSPTS 1707
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 507 WLHASIHSADRYKRNNAKIYSQQRKAAPAFKCGLNTEY 620
W+H H D Y + +Y +KAA A K T+Y
Sbjct: 332 WIHPYGHKKDAYPGDIKDLYEVGKKAAQALKRVYGTKY 369
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 507 WLHASIHSADRYKRNNAKIYSQQRKAAPAFKCGLNTEY 620
W+H H D Y + +Y +KAA A K T+Y
Sbjct: 332 WIHPYGHKKDAYPGDIKDLYEVGKKAAQALKRVYGTKY 369
>AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical
protein W10D9.4 protein.
Length = 403
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 544 KGIMQRFIASKGKLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPP--IINRTPEGKPV 717
+G MQ ++ K K A TPN PLI TP+ VS P + P+G+ +
Sbjct: 262 QGQMQIYVDPKTK--QHFAAKETPNGMELYPLIIQDTPLQLENVSGPNQFVMNMPDGRAI 319
Query: 718 RKGYG 732
G G
Sbjct: 320 PHGMG 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,579,179
Number of Sequences: 27780
Number of extensions: 338651
Number of successful extensions: 1379
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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