Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G22
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.53 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.53 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   2.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   2.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   8.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   8.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   8.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 209 IHYFLKQFHLQQHYFIEVHNFTPYFL 132
           ++YF +   L   YF+  HN+ P+ L
Sbjct: 219 LNYFTEDVGLNHFYFMLNHNYPPFML 244


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 209 IHYFLKQFHLQQHYFIEVHNFTPYFL 132
           ++YF +   L   YF+  HN+ P+ L
Sbjct: 219 LNYFTEDVGLNHFYFMLNHNYPPFML 244


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 149 FTPYFLLKLCHNCVH 105
           FT Y +   C NC+H
Sbjct: 26  FTMYLVRAFCRNCIH 40


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 149 FTPYFLLKLCHNCVH 105
           FT Y +   C NC+H
Sbjct: 474 FTMYLVRAFCRNCIH 488


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 224 YY*RSIHYFL-KQFHLQQHYFIEVHNFTPYFLLKLCHNCVHRIKLFCFNK 78
           Y+  S  Y + K+   Q +YF+     T YFL ++  N + +   F +NK
Sbjct: 243 YWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERM-SNDLGKTAEFDWNK 291


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 224 YY*RSIHYFL-KQFHLQQHYFIEVHNFTPYFLLKLCHNCVHRIKLFCFNK 78
           Y+  S  Y + K+   Q +YF+     T YFL ++  N + +   F +NK
Sbjct: 243 YWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERM-SNDLGKTAEFDWNK 291


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 274 ITTVFTSWLFMP*GIVVYYYN 336
           + T+FT    +P  +++YYY+
Sbjct: 212 VATIFTFSYCIPMILIIYYYS 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,871
Number of Sequences: 438
Number of extensions: 4076
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)