Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G19
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0159 - 18619674-18619685,18619916-18619993,18620504-18620827     33   0.39 
02_05_0900 + 32616049-32616135,32616593-32616695,32616925-326170...    31   1.6  
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525...    29   3.6  
01_02_0006 + 10118766-10118775,10119383-10119526,10120534-101206...    29   3.6  
01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324...    29   6.4  

>05_04_0159 - 18619674-18619685,18619916-18619993,18620504-18620827
          Length = 137

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 526 LLAFSHFRFDLDFGEPVLYCYEVQVE 603
           L+ F H+RF L+   PV+Y YE+Q+E
Sbjct: 61  LIGFVHYRFVLEEDVPVVYVYELQME 86


>02_05_0900 +
           32616049-32616135,32616593-32616695,32616925-32617004,
           32617118-32617447,32617623-32617735,32617861-32617903,
           32617968-32618045,32618328-32618339
          Length = 281

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 526 LLAFSHFRFDLDFGEPVLYCYEVQV 600
           L+ F H+RF L+   PV+Y YE+Q+
Sbjct: 153 LIGFVHYRFVLEEDVPVVYVYELQM 177


>11_06_0388 +
           23048576-23051546,23051830-23052371,23052444-23052517,
           23053006-23053090,23053281-23053367,23053585-23053657,
           23053882-23053925,23054041-23054169,23054301-23054402,
           23054529-23054585
          Length = 1387

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 566 PKSRSNLKCEKARSVPFFSRAIRYQAASSVISSSLRLGFQ 447
           PK +S +  E+   V F  + + Y  ASS I    +LG Q
Sbjct: 608 PKEQSGVSIEEIEHVSFEDKPLSYYGASSNIEDMTKLGIQ 647


>01_02_0006 +
           10118766-10118775,10119383-10119526,10120534-10120659,
           10120885-10121003,10121355-10121609
          Length = 217

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +1

Query: 400 LTEKNMKTLYETCAWGWNPNRKLEEMTDDAAWYLIAREKNGTLLAFSH 543
           + EK+         WG NP + L ++TDD   ++     N + LA +H
Sbjct: 121 VVEKHGMVAAGALVWGGNPAKFLRKLTDDEITFIKESASNYSTLAKAH 168


>01_01_0426 +
           3234987-3235935,3236744-3236782,3237044-3237409,
           3240871-3242315
          Length = 932

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -3

Query: 453 IPTPCTSFIECLHIFFSQVYGPL*YLFIQFSDLLYIHV 340
           IP+P TS +  + +  +Q+ GP+   F Q ++L Y+++
Sbjct: 481 IPSPLTSSLSSIDLSDNQLSGPIPKSFFQLTNLNYLNL 518


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,330,240
Number of Sequences: 37544
Number of extensions: 346512
Number of successful extensions: 879
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)