Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G19
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    27   0.17 
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   6.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   6.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   6.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   6.4  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   6.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   6.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.4  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 475 FPPAYD*DSNPMHKFHRVSSYFFQSSLWPTVIP 377
           +PP +D D + ++   +  SY + S  W TV P
Sbjct: 109 YPPFWDEDQHRLYAQIKTGSYDYPSPEWDTVTP 141


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LLPTISSNLNNGKKINNSYKQ 193
           ++ ++S+N N     NN+YKQ
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQ 101


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LLPTISSNLNNGKKINNSYKQ 193
           ++ ++S+N N     NN+YKQ
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQ 101


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LLPTISSNLNNGKKINNSYKQ 193
           ++ ++S+N N     NN+YKQ
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQ 101


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LLPTISSNLNNGKKINNSYKQ 193
           ++ ++S+N N     NN+YKQ
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQ 101


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LLPTISSNLNNGKKINNSYKQ 193
           ++ ++S+N N     NN+YKQ
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQ 101


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LLPTISSNLNNGKKINNSYKQ 193
           ++ ++S+N N     NN+YKQ
Sbjct: 81  IISSLSNNYNYSNYNNNNYKQ 101


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 365 SVTFCIYMSTSRSRL-RKTNNSLXQGCQVLKFIRSCNVGHSIS 240
           S+ F  Y   +   L R+      +   + +  R CN+GH IS
Sbjct: 239 SIMFSHYDRNNNGNLEREELEQFAENEDLEELCRGCNLGHMIS 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,908
Number of Sequences: 438
Number of extensions: 4137
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)