Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G16
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389...    34   0.13 
08_02_0490 - 17724878-17725045,17725264-17725342,17725434-177254...    30   2.1  
02_04_0523 + 23668232-23668483,23668790-23668927,23669627-236696...    29   3.8  
11_06_0743 + 26847652-26849424                                         29   5.0  
08_02_0277 - 15226062-15226169,15227075-15227203,15227416-152275...    29   6.6  
03_02_0787 + 11180794-11180958,11181051-11181230,11181396-111816...    28   8.7  
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443     28   8.7  

>06_03_0099 +
           16633928-16638213,16638299-16638386,16638823-16638950,
           16640008-16640278
          Length = 1590

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 15/39 (38%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
 Frame = +1

Query: 550 TRERYHE-VDQRENSSPEEPSQRYDTEEIENFD-RKHEN 660
           +R R+H+ VD+R   + EE +QRY +  +++FD +KH++
Sbjct: 465 SRVRWHDNVDKRAEQTSEERNQRYSSSVVQSFDEKKHDH 503


>08_02_0490 -
           17724878-17725045,17725264-17725342,17725434-17725498,
           17725569-17725657,17725750-17725858,17725969-17726047,
           17727247-17727512
          Length = 284

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 512 RKMHMLDEDSSWKHVKDITKLIRGKTQVPKSLHNDM 619
           R  HM      W   KD+ +LI+G+  V  +LH+D+
Sbjct: 145 RPKHMNKAKDFWVVQKDVAELIKGRILVGHALHHDL 180


>02_04_0523 +
           23668232-23668483,23668790-23668927,23669627-23669695,
           23670461-23670508
          Length = 168

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 31  WEFLKILVDCCCNVLSQIGVIGGTTFAE*AGDQSSLRIQHDQQP 162
           WE  + ++       SQ G +  T+  E AG    L++QHDQ P
Sbjct: 68  WEESRDIISTLGGYESQFGGMASTSALEMAGMDRYLQLQHDQVP 111


>11_06_0743 + 26847652-26849424
          Length = 590

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -1

Query: 416 GRCL*TQPKICLRRLRATCNSSGS*RWPEPRL 321
           GRC    P+ C RR RA  +SS S  WPEP L
Sbjct: 304 GRC---SPR-CRRRARAPPSSSTSPPWPEPAL 331


>08_02_0277 -
           15226062-15226169,15227075-15227203,15227416-15227583,
           15227665-15228123,15228865-15229008
          Length = 335

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +2

Query: 557 KDITKLIRGKTQVPKSLHNDMIQKKLKILTENMKIENELXSKKGKND 697
           +D+TKL+  K ++ KS   ++   K K+L    ++EN +   K ++D
Sbjct: 147 EDLTKLVLEKEELLKSKDEEVKDMKDKVLRSYAEMENVIARTKRESD 193


>03_02_0787 +
           11180794-11180958,11181051-11181230,11181396-11181611,
           11181693-11181875,11182013-11182234,11182434-11182550,
           11182682-11182825,11183198-11183299,11183762-11183830,
           11184283-11184516
          Length = 543

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 266 EFNIGDLDEIKKREGITTEDVVQASVMIRNYCKSH 370
           +F++ D  E+KK E  T  DV      ++  C S+
Sbjct: 148 DFSVADAKEVKKIEKTTNHDVKAVEYFLKQKCSSN 182


>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
          Length = 221

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -2

Query: 514 TRTKQSQLQFFSDQASP---DVKYDVVHINFYVSFSGDVFELNQKFV*GDCVRLAIVPDH 344
           T+ K         +ASP   +V  +V   +FY + SG VF+L  K + G     A V +H
Sbjct: 81  TKYKAEGADLLPAEASPAKLEVWLEVESHHFYPAISGLVFQLLIKPLLGGATDTAAVDEH 140

Query: 343 NAGLNHV 323
            A L  V
Sbjct: 141 AAALAQV 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,037,337
Number of Sequences: 37544
Number of extensions: 422283
Number of successful extensions: 1089
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)