Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G16
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   0.53 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   0.53 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   1.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.5  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   8.6  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 455 FYIRRRLVAEELKLALLCPRKMHMLDEDSSWKHVKDITKLIR 580
           FY R ++  + +  AL  P K+   +ED +W+ +   TK +R
Sbjct: 79  FYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPI--ATKYLR 118


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 455 FYIRRRLVAEELKLALLCPRKMHMLDEDSSWKHVKDITKLIR 580
           FY R ++  + +  AL  P K+   +ED +W+ +   TK +R
Sbjct: 94  FYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPI--ATKYLR 133


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 584 KTQVPKSLHNDMIQKKLKILTENMKIENELXSKK 685
           KT + K + ND+   K+ I  EN+++  E   KK
Sbjct: 36  KTGINKQIINDVNDGKINIEDENVQLYIECAMKK 69


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 95  EEQLSPNKRATSRHYEFNMINN 160
           +EQL+ +K  ++ H EF  +NN
Sbjct: 475 QEQLTLSKVTSNYHEEFQSLNN 496


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 293 SRPSRRY*IRSVRLCGCRSGRVRAR 219
           SR  RR  +R   LC C  GRVR R
Sbjct: 394 SRDFRRAFVRI--LCACCPGRVRRR 416


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 152 INNPPPKSSYLKACFPT 202
           I NP  K  Y+ A FP+
Sbjct: 4   ITNPKGKKRYITAAFPS 20


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = +1

Query: 547 ETRERYHEVDQRENSSPEEPS--QRYD-TEEIENFDRKHEN*ERIXIEKGQKRLL*HK-R 714
           E   RY ++   +    EE +  +RY  + E E    K+E   R   E  ++R    + R
Sbjct: 236 EKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRRER 295

Query: 715 HFFEYEKTSDARXX*CXRINNYSQNDSYKHM 807
              +  K   +    C   NNY  N++YK +
Sbjct: 296 ERSKEPKIISSLSNSCNYSNNYYNNNNYKKL 326


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 496 QLQFFSDQASPDVKYDVVHINFYV 425
           Q +F+S  +SPDV    +H+   V
Sbjct: 895 QPRFYSISSSPDVHQGQIHLTVAV 918


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,104
Number of Sequences: 438
Number of extensions: 5135
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)