Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_G15
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 84 2e-16
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 69 5e-12
11_01_0767 + 6438648-6438809,6439146-6440000 65 6e-11
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 64 1e-10
11_01_0750 - 6315126-6315896,6316371-6316784 64 2e-10
04_04_0619 + 26652923-26653267,26653440-26654273 59 5e-09
11_02_0012 - 7346282-7347136,7347234-7347593 58 7e-09
01_01_1152 + 9170628-9171899 58 1e-08
11_02_0011 - 7337618-7338496,7338596-7338991 56 4e-08
11_01_0771 + 6453130-6454488 56 5e-08
11_02_0014 - 7352619-7352918,7353173-7353418 54 2e-07
05_06_0044 - 25150322-25151260 50 2e-06
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 5.0
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 6.6
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Frame = +2
Query: 398 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 574
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E T
Sbjct: 96 GPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAG 155
Query: 575 RIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVP 736
RIKD + D++ AT VL NA+YFKG W SKFD R TSD FY+ + P
Sbjct: 156 RIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAP 209
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 68.9 bits (161), Expect = 5e-12
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +2
Query: 518 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDR 697
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDG 268
Query: 698 DFYVSKDKTIKVP 736
+F++ K+++ P
Sbjct: 269 EFHLLDGKSVQAP 281
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +2
Query: 542 INDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 721
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D +F++ +
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 722 TIKVP 736
+++ P
Sbjct: 529 SVQAP 533
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 485 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 661
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 662 SSKFDERLTSDRDFYVSKDKTIKVP 736
+ FD+ T++R+F +++VP
Sbjct: 102 LAPFDKSDTAEREFRRLDGSSVEVP 126
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +2
Query: 533 AKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVS 712
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F +
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 713 KDKTIKVP 736
K++ P
Sbjct: 66 DGKSVLAP 73
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 63.7 bits (148), Expect = 2e-10
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +2
Query: 377 RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDW 553
RD + G L A V+ L F ++ +V+ S + DF +K A IN W
Sbjct: 90 RDRSTSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSW 149
Query: 554 VEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKV 733
V+++T + L+ ++ T VL +A+YF+G W + D R T+++ FY +++V
Sbjct: 150 VKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEV 209
Query: 734 P 736
P
Sbjct: 210 P 210
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 58.8 bits (136), Expect = 5e-09
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +2
Query: 404 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNT-VAAKSINDWVEENTNNRI 580
+L A ++V +L F + + +++DF AA +N ++ + TN R+
Sbjct: 76 QLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRL 135
Query: 581 KDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVP 736
+ ++P + S+T VL NA++FK W KF+ T R F+ + VP
Sbjct: 136 NNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVP 187
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 58.4 bits (135), Expect = 7e-09
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERL 685
DF + ++ K IN WV + TN I++++ S+ TA VLVNAIYFKG WS+ F
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRER 175
Query: 686 TSDRDFYVSKDKTIKVP 736
T+ F+ ++ P
Sbjct: 176 TTTGKFHRLDGSSVDAP 192
>01_01_1152 + 9170628-9171899
Length = 423
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +2
Query: 425 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVNPD 601
V+V G L FA + + + + DF+ A+ +N +V + T I+D++ P+
Sbjct: 123 VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPN 182
Query: 602 SLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVP 736
S+ S+T VL NA++FKG WS F T F++ ++ P
Sbjct: 183 SVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAP 227
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 56.0 bits (129), Expect = 4e-08
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +2
Query: 536 KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 715
K IN WV + TN I +++ S+ TA VLVNAIYFKG WS+ F T+ F+
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLD 197
Query: 716 DKTIKVP 736
++ VP
Sbjct: 198 GSSVDVP 204
>11_01_0771 + 6453130-6454488
Length = 452
Score = 55.6 bits (128), Expect = 5e-08
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +2
Query: 449 LDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGV 628
+D ++ + + V ++ K A K IN W T I D++ P S+ TA V
Sbjct: 146 IDAFILLLDPSMIDQCVLDLVSEKAEEARKQINAWARRATGKLITDVLPPRSVGPETAVV 205
Query: 629 LVNAIYFKGAWSSKFDERLTSDRDFY 706
L NAIYFKG W F+E T + FY
Sbjct: 206 LGNAIYFKGKWDRPFNESDTERKPFY 231
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +2
Query: 536 KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 715
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+ F+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLD 147
Query: 716 DKTIKV 733
++ V
Sbjct: 148 GSSVNV 153
>05_06_0044 - 25150322-25151260
Length = 312
Score = 50.4 bits (115), Expect = 2e-06
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Frame = +2
Query: 425 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDL---- 589
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILSNS 59
Query: 590 VNPDSLSSATAG-------VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVP 736
++ D S G L N++YF W F LT + DF+VS D ++VP
Sbjct: 60 IDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVP 115
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +2
Query: 341 DDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 463
++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 595 EESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 356 TEFASKSRDLRSIKGVELKMANKVYVHDG 442
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,688,989
Number of Sequences: 37544
Number of extensions: 404789
Number of successful extensions: 970
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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