Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G11
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41109-16|AAO12424.1|  440|Caenorhabditis elegans Hypothetical p...    83   3e-16
U41109-15|AAZ91354.1|  819|Caenorhabditis elegans Hypothetical p...    83   3e-16
U41109-14|AAO12423.1|  840|Caenorhabditis elegans Hypothetical p...    83   3e-16
Z77666-1|CAB01226.1|  399|Caenorhabditis elegans Hypothetical pr...    35   0.067
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical ...    30   1.9  

>U41109-16|AAO12424.1|  440|Caenorhabditis elegans Hypothetical
           protein F52E1.13b protein.
          Length = 440

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
 Frame = +1

Query: 484 GYMWSLAFSTSQHGFSLASMYRKMQRVD---SPVLLVIQDTDNNVFGAMTSCALHPSEHF 654
           GY W   +++ +HGFSLA+MYRKM   D   SPVLL+I+DT  +VFGA+ S A+ P++HF
Sbjct: 287 GYPWVNIYNSEKHGFSLATMYRKMAEFDEDLSPVLLIIRDTKEHVFGAVVSSAIRPNDHF 346

Query: 655 YGTGESFL 678
           +GTG+S L
Sbjct: 347 FGTGDSCL 354


>U41109-15|AAZ91354.1|  819|Caenorhabditis elegans Hypothetical
           protein F52E1.13c protein.
          Length = 819

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
 Frame = +1

Query: 484 GYMWSLAFSTSQHGFSLASMYRKMQRVD---SPVLLVIQDTDNNVFGAMTSCALHPSEHF 654
           GY W   +++ +HGFSLA+MYRKM   D   SPVLL+I+DT  +VFGA+ S A+ P++HF
Sbjct: 666 GYPWVNIYNSEKHGFSLATMYRKMAEFDEDLSPVLLIIRDTKEHVFGAVVSSAIRPNDHF 725

Query: 655 YGTGESFL 678
           +GTG+S L
Sbjct: 726 FGTGDSCL 733


>U41109-14|AAO12423.1|  840|Caenorhabditis elegans Hypothetical
           protein F52E1.13a protein.
          Length = 840

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
 Frame = +1

Query: 484 GYMWSLAFSTSQHGFSLASMYRKMQRVD---SPVLLVIQDTDNNVFGAMTSCALHPSEHF 654
           GY W   +++ +HGFSLA+MYRKM   D   SPVLL+I+DT  +VFGA+ S A+ P++HF
Sbjct: 687 GYPWVNIYNSEKHGFSLATMYRKMAEFDEDLSPVLLIIRDTKEHVFGAVVSSAIRPNDHF 746

Query: 655 YGTGESFL 678
           +GTG+S L
Sbjct: 747 FGTGDSCL 754


>Z77666-1|CAB01226.1|  399|Caenorhabditis elegans Hypothetical
           protein K08E7.1 protein.
          Length = 399

 Score = 35.1 bits (77), Expect = 0.067
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +1

Query: 493 WSLAFSTSQHGFSLASMYRKMQRVDSPVLLVIQDTDNNVFGAMTSCALHPSEHFYGTGES 672
           W+L +S  +HG S + +  K    + P ++VI+      FG   S        + GT E 
Sbjct: 200 WTLLYSNMKHGQSFSQLV-KCINGEGPCMIVIRSMKGRRFGFFASQGFLAGPQYRGTAEC 258

Query: 673 FLY 681
           FL+
Sbjct: 259 FLF 261


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 650  CSDGCRAHDVMAPNTLLSVSCMTRSTGLSTRCILRYMDASENPCWL 513
            C+D C    +   N + +V C+ +      RC LR+  AS N  W+
Sbjct: 1198 CNDFCLNDGICKKNNIGNVECICKDHFSGDRCELRF-QASNNKLWI 1242


>AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.3 protein.
          Length = 679

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 698 RKTRARGLTXRXHADDSNKETDSDNXSDTKKEXTNNRKRSK 820
           +  R R    R  A  S+ ++DSD+  D KK   N  KRSK
Sbjct: 203 KSPRKRSSKKRRAASVSDSDSDSDSDFDKKKWKKNKAKRSK 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,708,679
Number of Sequences: 27780
Number of extensions: 327744
Number of successful extensions: 1008
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)