Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G08
         (1150 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         31   1.7  
10_07_0161 - 13674631-13675433,13675793-13675862                       30   3.0  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   6.9  
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     29   9.1  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 19/84 (22%), Positives = 23/84 (27%)
 Frame = +2

Query: 614 PYXPARPPPGXXXXAPGXFPTXPFXXPXPXXPXPGVXDRXXXLXGAXSXTPXPRXXAXSP 793
           P  P  PPP      PG  P      P P  P P    +   +       P P      P
Sbjct: 218 PPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPP 277

Query: 794 QSXXXXHXXRXPRRSLPXXPXARP 865
           +          P  + P  P   P
Sbjct: 278 EDYWSPTAVTPPEPTKPKPPPPSP 301


>10_07_0161 - 13674631-13675433,13675793-13675862
          Length = 290

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = -2

Query: 714 GXGWXGXGXXXGXVGKXPGAXXXXPGGGRAGX*GXXXNEG 595
           G GW G G   G  G   GA     GGG  G  G    +G
Sbjct: 187 GGGWTGGGNGGGGSGGGGGARGSSGGGGGGGWAGGGGGQG 226


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = +2

Query: 596 PSFXXXPYXPARPPPGXXXXAPGXF-PTXPFXXPXPXXPXPGVXDR 730
           PSF   P  P  PPP      P  F P  P   P P  P P +  R
Sbjct: 314 PSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPPYP-SPPPSMYSR 358


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 19/82 (23%), Positives = 22/82 (26%)
 Frame = +2

Query: 614 PYXPARPPPGXXXXAPGXFPTXPFXXPXPXXPXPGVXDRXXXLXGAXSXTPXPRXXAXSP 793
           P    +P P      PG  P  P   P P  P PG   +           P P      P
Sbjct: 159 PGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKP 218

Query: 794 QSXXXXHXXRXPRRSLPXXPXA 859
           +          P    P  P A
Sbjct: 219 KPGPPQPWWPIPFPKPPCPPGA 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,575,437
Number of Sequences: 37544
Number of extensions: 178515
Number of successful extensions: 323
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3491481604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)