Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_G08
         (1150 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    31   3.9  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    31   3.9  
AL031366-1|CAA20520.1|  809|Drosophila melanogaster EG:100G7.6 p...    30   5.2  
AE014298-475|AAF45833.2|  887|Drosophila melanogaster CG3588-PB,...    30   5.2  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
 Frame = +2

Query: 617 YXPARPPPGXXXXAPGXFPTXPFXXPXPXXPXPGVXDRXXXLXGAXSXTP-XPRXXAXSP 793
           Y P  PPPG     P   P  P   P P  P P          G    TP  P+  A  P
Sbjct: 239 YGPPTPPPGPGPAQPAPQPPRP-QPPRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAPVP 297

Query: 794 Q 796
           +
Sbjct: 298 E 298



 Score = 29.9 bits (64), Expect = 6.9
 Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 1/91 (1%)
 Frame = +2

Query: 596 PSFXXXPYXPARPPPGXXXXAPGXFPT-XPFXXPXPXXPXPGVXDRXXXLXGAXSXTPXP 772
           PS+      P RPPP     AP   P+  P   P P  P            G     P P
Sbjct: 117 PSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQP-P 175

Query: 773 RXXAXSPQSXXXXHXXRXPRRSLPXXPXARP 865
                SP S         P +  P    +RP
Sbjct: 176 APQPPSPPSPQPGPEYLPPDQPKPRPTPSRP 206


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
 Frame = +2

Query: 617 YXPARPPPGXXXXAPGXFPTXPFXXPXPXXPXPGVXDRXXXLXGAXSXTP-XPRXXAXSP 793
           Y P  PPPG     P   P  P   P P  P P          G    TP  P+  A  P
Sbjct: 239 YGPPTPPPGPGPAQPAPQPPRP-QPPRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAPVP 297

Query: 794 Q 796
           +
Sbjct: 298 E 298



 Score = 29.9 bits (64), Expect = 6.9
 Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 1/91 (1%)
 Frame = +2

Query: 596 PSFXXXPYXPARPPPGXXXXAPGXFPT-XPFXXPXPXXPXPGVXDRXXXLXGAXSXTPXP 772
           PS+      P RPPP     AP   P+  P   P P  P            G     P P
Sbjct: 117 PSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQP-P 175

Query: 773 RXXAXSPQSXXXXHXXRXPRRSLPXXPXARP 865
                SP S         P +  P    +RP
Sbjct: 176 APQPPSPPSPQPGPEYLPPDQPKPRPTPSRP 206


>AL031366-1|CAA20520.1|  809|Drosophila melanogaster EG:100G7.6
           protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +2

Query: 596 PSFXXXPYXPARPPPGXXXXAPGXFPTXPFXXPXPXXPXP 715
           PS+   P  P  PPP     AP   P  P   P P  P P
Sbjct: 639 PSYPPPPPPPPPPPPPQTCCAPVRPPYAPPVRPLPPPPPP 678


>AE014298-475|AAF45833.2|  887|Drosophila melanogaster CG3588-PB,
           isoform B protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +2

Query: 596 PSFXXXPYXPARPPPGXXXXAPGXFPTXPFXXPXPXXPXP 715
           PS+   P  P  PPP     AP   P  P   P P  P P
Sbjct: 779 PSYPPPPPPPPPPPPPQTCCAPVRPPYAPPVRPLPPPPPP 818


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,134,023
Number of Sequences: 53049
Number of extensions: 274548
Number of successful extensions: 596
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6046141584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)