Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_G04
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47358-7|CAA87435.1| 369|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical pr... 30 2.6
U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical pr... 29 3.4
U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical pr... 29 3.4
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 4.5
>Z47358-7|CAA87435.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1307.9 protein.
Length = 369
Score = 159 bits (386), Expect = 2e-39
Identities = 66/93 (70%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Frame = +1
Query: 286 PPXYDPKVG-GLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCNNHIGMGVRYNA 462
PP ++ K LN + GTHALRERA+K+ GIL+IRFEMP+NIWC GC+NH+GMGVRYNA
Sbjct: 12 PPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCHNHVGMGVRYNA 71
Query: 463 EKKKIGMYYTTPVYQFRMKCHLCDNHFEIKTDP 561
EKKKIGMYYTTP+++FRMKCHLCDN++ I+TDP
Sbjct: 72 EKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDP 104
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +2
Query: 566 NLDYVIVSGARRQENRWDPTENGQIVPETKEAQKKLFDDAMFRLEHKKGDEDLSKTDKPR 745
N DY +V G RQE R+DPT+ QI + +KL DAMF+ EH+ D+D + T++ R
Sbjct: 106 NFDYELVEGCSRQELRFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGR 165
Query: 746 LGRLVGRNEGVWXDDYEANCALRRXLGKEGKSL 844
+ +L E + DD+ AN LR E KSL
Sbjct: 166 VDKLEWIQERM-RDDFTANSFLRAQFRNEKKSL 197
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 252 MGERKGQNLYYPP 290
MGERKGQN YYPP
Sbjct: 1 MGERKGQNFYYPP 13
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 31.9 bits (69), Expect = 0.63
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = -1
Query: 774 PSFLPTNLPSLGLSVLDRSSSPFLCSSLNMASSNNFFCASLVSGTI*PFSVGSHLFSCLR 595
PS+ T++ L ++ + SS FL +++ F L++ T+ F+ +H+F
Sbjct: 167 PSWSMTHMTELSQAIGEPSSPTFLPITISPFGDKMTFKERLLN-TLADFTF-THIFQ--- 221
Query: 594 APDTIT*SKFXWISFDFKVIITQMTF 517
P T+T K+ +FDFK I++Q F
Sbjct: 222 -PPTLTSFKYPHQTFDFKEILSQAPF 246
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 31.9 bits (69), Expect = 0.63
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = -1
Query: 774 PSFLPTNLPSLGLSVLDRSSSPFLCSSLNMASSNNFFCASLVSGTI*PFSVGSHLFSCLR 595
PS+ T++ L ++ + SS FL +++ F L++ T+ F+ +H+F
Sbjct: 167 PSWSMTHMTELSQAIGEPSSPTFLPITISPFGDKMTFKERLLN-TLADFTF-THIFQ--- 221
Query: 594 APDTIT*SKFXWISFDFKVIITQMTF 517
P T+T K+ +FDFK I++Q F
Sbjct: 222 -PPTLTSFKYPHQTFDFKEILSQAPF 246
>Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical
protein K03H1.9 protein.
Length = 148
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 433 HIGMGVRYNAEKKKIGMYYTTPVYQFRMKCHLCDNHFEIKTDPXELGLCDSVRSSETRKQ 612
H+ M R+ + + + Y T + RM+ L N EI+ + E + ETRK+
Sbjct: 48 HVTMSGRFQSIQCLLQNYLMT-LTLIRMENQLTPN-LEIRRNQRESNQKQAKSQRETRKE 105
Query: 613 MGSHRERSDCS 645
M R+RS CS
Sbjct: 106 MRRRRKRSLCS 116
>U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical
protein C06A8.6 protein.
Length = 349
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -2
Query: 209 TVFF*RSTKLTRIHGLLNFYSRNYLEYVSNNIILII*QWTNFKTTLIHL*SRQVKILRN 33
T+FF + K+T+I GL YLE N I I N K + L + Q++++ N
Sbjct: 124 TLFFVHN-KITKIEGLDTLTELEYLELGDNRIAKIENLDNNLKLDRLFLGANQIRLIEN 181
>U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical
protein B0244.10 protein.
Length = 628
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 251 CGFV-TVASFIDVFSTVFF*RSTKLTRIHGLLNFY 150
CG + VAS IDVF + ST + I G+LNFY
Sbjct: 28 CGLIRNVASSIDVFHWLDVYISTTIFVISGILNFY 62
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +1
Query: 487 YTTPVYQFRMKCHLCDNHFEIKTDPXELGLCDSVRSSETRKQMGSHRERSDCSGNQRSTE 666
Y + + R K L D ++KT E L D R + + +G H + Q S +
Sbjct: 1543 YFVTMNEIREKEQLLDQILDLKTGLPETVLADVERKLQVLETVGDHMDTLTIKAEQMSDD 1602
Query: 667 KVV 675
+V+
Sbjct: 1603 EVI 1605
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,535,639
Number of Sequences: 27780
Number of extensions: 463383
Number of successful extensions: 1164
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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