Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_F24
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071359-1|AAL48981.1|  124|Drosophila melanogaster RE39488p pro...   119   5e-27
AE014296-2169|AAF49893.1|  124|Drosophila melanogaster CG10753-P...   119   6e-27
AE014296-2128|AAF49929.1|   95|Drosophila melanogaster CG10418-P...    33   0.70 
BT001620-1|AAN71375.1|  154|Drosophila melanogaster RE35747p pro...    31   1.6  
AE014134-1871|AAF52938.3|  154|Drosophila melanogaster CG17768-P...    31   1.6  
AY113474-1|AAM29479.1|   79|Drosophila melanogaster RE43665p pro...    30   4.9  
AE013599-3092|AAF46645.1|   79|Drosophila melanogaster CG9344-PA...    30   4.9  

>AY071359-1|AAL48981.1|  124|Drosophila melanogaster RE39488p
           protein.
          Length = 124

 Score =  119 bits (287), Expect = 5e-27
 Identities = 55/66 (83%), Positives = 63/66 (95%)
 Frame = +1

Query: 118 MKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLETLSI 297
           MKLVRFLMKLSHETVTIELKNG+ +HGTITGVDVAMNTHLK+V++T+KNR+ + LETLSI
Sbjct: 1   MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDHVHLETLSI 60

Query: 298 RGNNIR 315
           RGNNIR
Sbjct: 61  RGNNIR 66


>AE014296-2169|AAF49893.1|  124|Drosophila melanogaster CG10753-PA
           protein.
          Length = 124

 Score =  119 bits (286), Expect = 6e-27
 Identities = 55/66 (83%), Positives = 63/66 (95%)
 Frame = +1

Query: 118 MKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLETLSI 297
           MKLVRFLMKLSHETVTIELKNG+ +HGTITGVDVAMNTHLK+V++T+KNR+ + LETLSI
Sbjct: 1   MKLVRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSI 60

Query: 298 RGNNIR 315
           RGNNIR
Sbjct: 61  RGNNIR 66


>AE014296-2128|AAF49929.1|   95|Drosophila melanogaster CG10418-PA
           protein.
          Length = 95

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +1

Query: 118 MKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNR--EELQLETL 291
           M    F   L  + V +ELKN   + GT+  VD  +N  L  + VT  ++    L ++  
Sbjct: 1   MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 60

Query: 292 SIRGNNIR 315
            IRG+ +R
Sbjct: 61  FIRGSVVR 68


>BT001620-1|AAN71375.1|  154|Drosophila melanogaster RE35747p
           protein.
          Length = 154

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 166 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREEL-QLETLSIRGNNIR 315
           +ELKNG   +G +   D  MN +L+ V  T K+ +   ++    IRG+ I+
Sbjct: 17  VELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIK 67


>AE014134-1871|AAF52938.3|  154|Drosophila melanogaster CG17768-PA,
           isoform A protein.
          Length = 154

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 166 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREEL-QLETLSIRGNNIR 315
           +ELKNG   +G +   D  MN +L+ V  T K+ +   ++    IRG+ I+
Sbjct: 17  VELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIK 67


>AY113474-1|AAM29479.1|   79|Drosophila melanogaster RE43665p
           protein.
          Length = 79

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +1

Query: 109 SSRMKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLET 288
           S +  L +F+ ++    V ++L NG    G +  +D  MN  L+  +  +  + + +   
Sbjct: 2   SRKEALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKNKYGD 61

Query: 289 LSIRGNNI 312
             IRGNN+
Sbjct: 62  AFIRGNNV 69


>AE013599-3092|AAF46645.1|   79|Drosophila melanogaster CG9344-PA
           protein.
          Length = 79

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +1

Query: 109 SSRMKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREELQLET 288
           S +  L +F+ ++    V ++L NG    G +  +D  MN  L+  +  +  + + +   
Sbjct: 2   SRKEALSQFINQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKNKYGD 61

Query: 289 LSIRGNNI 312
             IRGNN+
Sbjct: 62  AFIRGNNV 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,852,296
Number of Sequences: 53049
Number of extensions: 528763
Number of successful extensions: 1620
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)